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Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2616 and Psyr_2617 are separated by 63 nucleotides
Psyr_2617 and Psyr_2618 are separated by 2 nucleotides
Psyr_2618 and Psyr_2619 are separated by 214 nucleotides
Psyr_2619 and Psyr_2620 are separated by 276 nucleotides
Psyr_2616: Psyr_2616 - Amino acid adenylation, at 3,131,727 to 3,172,340
_2616
Psyr_2617: Psyr_2617 - Secretion protein HlyD, at 3,172,404 to 3,173,561
_2617
Psyr_2618: Psyr_2618 - ABC transporter:Protein of unknown function DUF214, at 3,173,564 to 3,175,525
_2618
Psyr_2619: Psyr_2619 - diaminobutyrate aminotransferase apoenzyme, at 3,175,740 to 3,177,074
_2619
Psyr_2620: Psyr_2620 - RND efflux system, outer membrane lipoprotein, NodT, at 3,177,351 to 3,178,781
_2620
Group
Condition
Psyr
_2616
Psyr
_2617
Psyr
_2618
Psyr
_2619
Psyr
_2620
in planta
apoplastic; Green bean; 6 days
-0.6
-0.4
-0.3
-0.6
-0.6
in planta
epiphytic; Lima bean
+0.1
-0.1
-0.1
-0.5
-1.0
in planta
apoplastic, chopping recovery; Green bean
-0.7
-0.6
-0.2
-0.0
+0.3
in planta
apoplastic, chopping recovery; Green bean
-0.7
-0.8
-0.0
+0.0
+0.5
stress
KB with capsaicin 0.125 mg/ml
+0.0
-0.8
-0.5
+0.1
+0.3
in planta
apoplastic, chopping recovery; Green bean
-0.6
-0.7
+0.2
+0.2
+0.3
stress
KB with Strychnine Sulfate 10 mM
+0.1
+0.4
+0.1
-0.7
-0.4
stress
KB with Biochanin a diacetate 10 mM
-0.0
-0.5
+0.1
+1.0
-0.7
stress
KB with Anethole 10 mM
+0.0
-0.5
+0.4
+0.5
-0.5
stress
KB with Avocadyne 10 mM
-0.0
+0.2
+0.2
+0.6
-1.0
stress
KB with Terpene 10 mM
+0.0
-0.4
+0.1
+1.1
-0.7
stress
KB with d-limonene 10 mM
+0.1
-0.3
+0.2
+0.9
-0.9
stress
KB with Emodin 10 mM
-0.0
+0.2
+0.2
+1.0
-1.2
stress
KB with Acridine orange 3.125 ug/ml
-0.0
+0.3
-0.1
-1.2
+1.2
stress
KB with Helenine 10 mM
+0.1
-0.5
+0.3
+1.1
-0.6
stress
KB with Prenyletin 10 mM
-0.0
-0.0
+0.3
+0.8
-0.6
stress
KB with Lupeol 10 mM
+0.1
-0.4
+0.2
+0.9
-0.3
stress
KB with Palmatine 10 mM
-0.2
-0.3
+0.2
+1.1
-0.2
stress
KB with Chaulmoogric 10 mM
+0.0
-0.1
+0.0
+1.1
-0.5
stress
KB with Nalidixic 0.775 ug/ml
+0.1
+0.0
-0.2
+1.2
-0.2
kb
KB
+0.1
-0.2
+0.2
+1.2
-0.3
stress
KB with Paclitaxel 10 mM
+0.1
-0.1
+0.2
+1.3
-0.5
stress
KB with 4-hydroxychalcone 10 mM
+0.0
-0.1
+0.2
+1.1
-0.2
stress
KB with Solanesol 10 mM
+0.1
-0.0
+0.3
+1.0
-0.3
stress
KB with Sclareolide 10 mM
+0.0
-0.0
+0.3
+1.2
-0.3
stress
KB with Veratrine 10 mM
+0.1
-0.3
+0.5
+1.4
-0.3
stress
KB with Mitomycin C 0.05 ug/ml
-0.1
+0.4
+0.4
-0.3
+0.8
stress
KB with Avocatin A 10 mM
+0.1
+0.0
+0.5
+1.2
-0.2
stress
KB with Hydrastine (1R, 9S) 10 mM
+0.0
+0.1
+0.5
+1.3
+0.0
stress
KB with Harmol 10 mM
+0.0
+0.4
+0.5
+1.7
-0.4
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