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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2589 and Psyr_2590 overlap by 11 nucleotides
Psyr_2590 and Psyr_2591 overlap by 4 nucleotides
Psyr_2591 and Psyr_2592 overlap by 8 nucleotides
Psyr_2592 and Psyr_2593 are separated by 10 nucleotides
Psyr_2589: Psyr_2589 - IucA/IucC, at 3,034,919 to 3,036,802
_2589
Psyr_2590: Psyr_2590 - Periplasmic binding protein, at 3,036,792 to 3,037,697
_2590
Psyr_2591: Psyr_2591 - transport system permease protein, at 3,037,694 to 3,038,683
_2591
Psyr_2592: Psyr_2592 - transport system permease protein, at 3,038,676 to 3,039,707
_2592
Psyr_2593: Psyr_2593 - ABC transporter, at 3,039,718 to 3,040,509
_2593
Group
Condition
Psyr
_2589
Psyr
_2590
Psyr
_2591
Psyr
_2592
Psyr
_2593
stress
KB with Lawsone 10 mM
+1.0
-3.6
-3.3
-3.2
-2.9
stress
KB with Curcumin 10 mM
+0.2
-2.1
-2.4
-3.8
-3.8
stress
KB with Piperine 10 mM
-0.3
-2.6
-2.4
-1.2
-3.6
stress
KB with Anethole 10 mM
+0.1
-2.7
-1.9
-2.3
-3.2
stress
KB with Emodin 10 mM
-0.3
-1.9
-1.6
-2.8
-2.0
stress
KB with Biochanin a diacetate 10 mM
+0.0
-2.0
-1.8
-1.6
-3.3
kb
KB
+0.2
-2.7
-1.7
-1.4
-2.8
stress
KB with Sclareolide 10 mM
+0.3
-1.8
-1.7
-3.0
-2.2
stress
KB with L-alliin 10 mM
+0.2
-2.9
-1.5
-1.9
-2.3
stress
KB with Hydrastine (1R, 9S) 10 mM
+0.1
-2.7
-1.6
-1.5
-2.5
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.1
-2.2
-1.9
-1.4
-2.3
stress
KB with 4-hydroxychalcone 10 mM
-0.1
-2.7
-1.7
-1.5
-1.7
stress
KB with Chaulmoogric 10 mM
+0.4
-1.5
-1.6
-2.4
-2.6
stress
KB with Helenine 10 mM
+0.2
-2.4
-1.6
-2.3
-1.3
stress
KB with Terpene 10 mM
+0.3
-1.3
-2.1
-2.1
-2.1
stress
KB with Palmatine chloride 10 mM
+0.5
-1.7
-1.3
-2.4
-2.1
stress
KB with Physcion 10 mM
+0.4
-1.5
-1.8
-2.7
-1.4
stress
KB with Avocadyne 10 mM
+0.1
-2.7
-1.3
-1.5
-1.1
stress
KB with Nonanoic 10 mM
+0.1
-1.6
-1.5
-1.4
-1.9
kb
KB
+0.5
-2.2
-1.7
-1.3
-1.6
stress
KB with Diallyl sulfide 10 mM
+0.6
-2.3
-1.7
-1.5
-1.2
stress
KB with Avocatin A 10 mM
+0.5
-2.2
-1.3
-0.8
-2.2
stress
KB with 4-acetoxyphenol 10 mM
+0.3
-2.0
-1.1
-1.2
-1.8
stress
KB with Chrysophanol 10 mM
+0.6
-1.4
-2.1
-0.8
-2.1
stress
KB with Auraptene 10 mM
+0.1
-1.0
-1.1
-1.9
-1.9
stress
KB with Conessine 10 mM
+0.5
-2.2
-1.1
-1.5
-0.9
stress
KB with Totarol 10 mM
+0.3
-0.8
-0.9
-1.8
-1.9
stress
KB with Paclitaxel 10 mM
-0.0
-0.9
-1.0
-1.6
-1.4
stress
KB with Palmatine 10 mM
-0.2
-1.6
-0.8
-0.5
-1.8
stress
KB with d-limonene 10 mM
+0.6
-1.3
-1.3
-0.9
-1.1
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