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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2528 and Psyr_2529 are separated by 20 nucleotides
Psyr_2529 and Psyr_2530 overlap by 4 nucleotides
Psyr_2530 and Psyr_2531 are separated by 188 nucleotides
Psyr_2531 and Psyr_2532 are separated by 24 nucleotides
Psyr_2528: Psyr_2528 - Polysaccharide deacetylase, at 2,939,423 to 2,940,325
_2528
Psyr_2529: Psyr_2529 - Amidohydrolase, at 2,940,346 to 2,941,605
_2529
Psyr_2530: Psyr_2530 - General substrate transporter:Major facilitator superfamily, at 2,941,602 to 2,942,912
_2530
Psyr_2531: Psyr_2531 - transcriptional regulator, LysR family, at 2,943,101 to 2,944,012
_2531
Psyr_2532: Psyr_2532 - transcriptional regulator, LysR family, at 2,944,037 to 2,944,942
_2532
Group
Condition
Psyr
_2528
Psyr
_2529
Psyr
_2530
Psyr
_2531
Psyr
_2532
in planta
epiphytic; Lima bean
-0.7
-0.3
-0.1
+0.3
+0.0
in planta
apoplastic, chopping recovery; Green bean
+0.2
-0.8
-0.2
+0.4
-0.3
stress
KB with Mitomycin C 0.05 ug/ml
-0.9
-0.6
-0.4
+0.3
+0.9
in planta
apoplastic, chopping recovery; Green bean
+0.4
-0.7
-0.2
+0.1
-0.0
in planta
apoplastic; Green bean; 6 days
-0.4
-0.7
-0.2
+0.3
+0.7
stress
KB with Avocadene 10 mM
+0.4
-0.6
+0.0
+0.3
-0.2
in planta
apoplastic; Green bean; 6 days
-0.3
-0.3
-0.2
+0.4
+0.5
in planta
apoplastic, chopping recovery; Green bean
+0.4
-0.7
-0.1
+0.7
-0.2
stress
KB with Nalidixic 0.775 ug/ml
+0.1
-0.4
-0.2
+0.6
+0.1
stress
KB with Escin 10 mM
+0.2
+0.4
-0.3
-0.3
+0.4
stress
KB with Levodopa 10 mM
+0.5
+0.4
-0.2
-0.0
-0.2
stress
KB with Gossypetin 10 mM
+0.8
-0.4
+0.0
+0.3
-0.0
stress
KB with Acridine orange 3.125 ug/ml
-0.3
+0.2
+0.2
-0.3
+0.9
stress
KB with Harmol Hydrochloride 10 mM
+0.4
-0.1
+0.2
+0.5
-0.3
stress
KB with Palmatine 10 mM
+0.9
-0.2
-0.1
+0.2
+0.3
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.3
+0.2
-0.2
+0.4
+0.4
stress
KB with 4-acetoxyphenol 10 mM
+0.5
+0.4
-0.1
+0.2
+0.2
stress
KB with d-limonene 10 mM
+0.8
+0.2
-0.2
+0.1
+0.3
stress
KB with Palmatine chloride 10 mM
+0.5
+0.7
-0.1
+0.2
+0.0
stress
KB with Conessine 10 mM
+1.0
-0.3
-0.1
+0.3
+0.5
stress
KB with Terpene 10 mM
+0.6
+0.4
+0.1
-0.1
+0.4
stress
KB with Avocatin A 10 mM
+0.5
+0.6
+0.0
+0.1
+0.1
stress
KB with Lawsone 10 mM
+0.7
+0.2
-0.0
+0.6
-0.0
stress
KB with Paclitaxel 10 mM
+0.8
+0.2
-0.2
+0.4
+0.5
stress
KB with L-alliin 10 mM
+0.7
+0.1
-0.2
+0.9
+0.1
stress
KB with Harmine 10 mM
+0.6
+0.8
+0.2
-0.4
+0.4
stress
KB with Diallyl sulfide 10 mM
+1.0
+0.3
-0.1
+0.4
+0.1
stress
KB with Totarol 10 mM
+0.5
+0.6
-0.3
+0.5
+0.4
stress
KB with Auraptene 10 mM
+1.0
+0.4
+0.1
+0.5
-0.2
stress
KB with Helenine 10 mM
+0.8
+0.2
-0.0
+0.4
+0.4
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