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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2514 and Psyr_2515 are separated by 3 nucleotides
Psyr_2515 and Psyr_2516 overlap by 4 nucleotides
Psyr_2516 and Psyr_2517 are separated by 81 nucleotides
Psyr_2517 and Psyr_2518 are separated by 293 nucleotides
Psyr_2514: Psyr_2514 - ABC transporter, at 2,923,886 to 2,924,599
_2514
Psyr_2515: Psyr_2515 - Binding-protein-dependent transport systems inner membrane component, at 2,924,603 to 2,925,451
_2515
Psyr_2516: Psyr_2516 - ABC transporter, substrate-binding protein, aliphatic sulfonate, at 2,925,448 to 2,926,458
_2516
Psyr_2517: Psyr_2517 - hypothetical protein, at 2,926,540 to 2,926,785
_2517
Psyr_2518: Psyr_2518 - conserved hypothetical protein, at 2,927,079 to 2,927,765
_2518
Group
Condition
Psyr
_2514
Psyr
_2515
Psyr
_2516
Psyr
_2517
Psyr
_2518
stress
KB with Mitomycin C 0.05 ug/ml
+0.1
-1.7
-0.3
N.D.
-0.7
in planta
epiphytic; Lima bean
-0.1
-0.4
-0.2
N.D.
-1.2
stress
KB with Harmine 10 mM
-0.6
-0.4
-0.3
N.D.
-0.5
in planta
apoplastic, chopping recovery; Green bean
-2.0
+0.6
+0.0
N.D.
-0.2
stress
KB with Oxedrine 10 mM
-0.9
-0.2
-0.0
N.D.
-0.3
stress
KB with Carbenicillin 3.1 ug/ml
-1.7
+0.4
+0.2
N.D.
-0.1
stress
KB with Sinomenine 10 mM
-0.2
-0.5
-0.0
N.D.
-0.4
stress
KB with Acridine orange 3.125 ug/ml
-0.2
-1.3
+0.0
N.D.
+0.3
in planta
epiphytic; Lima bean
-0.2
-1.2
+0.1
N.D.
+0.3
stress
KB with Tetracycline 0.0015 ug/ml
-0.6
-0.3
+0.1
N.D.
-0.2
stress
KB with Chrysophanol 10 mM
-0.6
-0.3
-0.1
N.D.
+0.0
in planta
apoplastic; Green bean; 6 days
-0.4
-0.4
+0.3
N.D.
-0.0
stress
KB with Levodopa 10 mM
-0.4
-0.3
+0.0
N.D.
+0.2
stress
KB with Palmatine 10 mM
+0.3
-0.3
-0.1
N.D.
-0.4
stress
KB with Flavone 0.125 mg/ml
+0.5
-0.5
-0.2
N.D.
-0.2
stress
KB with Avocatin A 10 mM
+0.3
-0.1
+0.1
N.D.
-0.6
stress
KB with Berberine 15.6 ug/ml
-0.4
+0.3
-0.1
N.D.
-0.2
stress
KB with Acriflavine 1.25 ug/ml
-0.6
+0.5
+0.1
N.D.
-0.4
in planta
apoplastic, chopping recovery; Green bean
-0.6
+0.8
-0.1
N.D.
-0.3
in planta
apoplastic, chopping recovery; Green bean
-0.7
+1.0
-0.4
N.D.
-0.1
stress
KB with Erythromycin 6.25 ug/ml
-0.5
+0.5
+0.1
N.D.
-0.2
kb
KB
+0.5
-0.4
-0.1
N.D.
-0.1
stress
KB with Lawsone 10 mM
+0.6
-0.0
-0.2
N.D.
-0.3
stress
KB with Piperacillin 0.775 ug/ml
-0.3
+0.6
+0.1
N.D.
-0.2
stress
KB with Cotarnine Chloride 10 mM
+0.4
+0.1
+0.2
N.D.
-0.5
stress
KB with Chloramphenicol 1.55 ug/ml
-0.3
+0.5
+0.3
N.D.
-0.1
stress
KB with 4-acetoxyphenol 10 mM
+0.6
+0.4
+0.0
N.D.
-0.1
stress
KB with Conessine 10 mM
+0.6
+0.5
+0.1
N.D.
-0.1
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.2
+0.5
+0.2
N.D.
+0.3
stress
KB with Helenine 10 mM
+0.6
+0.2
+0.2
N.D.
+0.3
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