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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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2
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2501 and Psyr_2502 are separated by 48 nucleotides
Psyr_2502 and Psyr_2503 are separated by 386 nucleotides
Psyr_2503 and Psyr_2504 are separated by 63 nucleotides
Psyr_2504 and Psyr_2505 are separated by 9 nucleotides
Psyr_2501: Psyr_2501 - Hemerythrin, at 2,911,758 to 2,912,240
_2501
Psyr_2502: Psyr_2502 - conserved hypothetical protein, at 2,912,289 to 2,912,648
_2502
Psyr_2503: Psyr_2503 - amino acid ABC transporter substrate-binding protein, PAAT family, at 2,913,035 to 2,913,886
_2503
Psyr_2504: Psyr_2504 - amino acid ABC transporter membrane protein 1, PAAT family, at 2,913,950 to 2,914,612
_2504
Psyr_2505: Psyr_2505 - amino acid ABC transporter membrane protein 2, PAAT family, at 2,914,622 to 2,915,284
_2505
Group
Condition
Psyr
_2501
Psyr
_2502
Psyr
_2503
Psyr
_2504
Psyr
_2505
stress
KB with capsaicin 0.125 mg/ml
N.D.
-1.1
-0.2
+0.1
-0.1
stress
KB with Dimethyl Sulfoxide 1.25 vol%
N.D.
-1.1
-0.0
+0.0
+0.1
stress
KB with Berberine 15.6 ug/ml
N.D.
-0.8
-0.2
+0.1
-0.0
stress
KB with Acriflavine 1.25 ug/ml
N.D.
-0.9
+0.1
-0.1
-0.1
in planta
Green bean; epiphytic
N.D.
-0.9
-0.1
+0.1
+0.2
in planta
Green bean; epiphytic
N.D.
-0.9
+0.0
+0.1
+0.2
stress
KB with Harmol Hydrochloride 10 mM
N.D.
-0.4
+0.0
-0.5
+0.3
stress
KB with Totarol 10 mM
N.D.
-1.1
+0.3
+0.1
+0.3
stress
KB with Escin 10 mM
N.D.
-0.4
+0.3
-0.3
+0.1
stress
KB with Veratrine 10 mM
N.D.
-0.5
+0.3
-0.3
+0.4
stress
KB with Hydrastine (1R, 9S) 10 mM
N.D.
-0.8
+0.1
+0.1
+0.4
stress
KB with Harmine 10 mM
N.D.
-0.7
+0.4
+0.2
+0.1
stress
KB with Chrysophanol 10 mM
N.D.
-0.6
+0.2
+0.0
+0.4
stress
KB with Nonanoic 10 mM
N.D.
-0.5
+0.2
+0.2
+0.2
stress
KB with Quercetin 360 ug/ml
N.D.
-0.5
+0.3
-0.1
+0.4
stress
KB with Anabasine Hydrochloride 10 mM
N.D.
-0.2
+0.2
-0.3
+0.5
in planta
epiphytic; Lima bean
N.D.
-1.1
+0.4
+0.1
+0.8
stress
KB with Palmatine 10 mM
N.D.
-0.7
+0.1
+0.0
+0.7
stress
KB with Dimethyl Sulfoxide 1.25 vol%
N.D.
-0.5
+0.3
+0.3
+0.3
in planta
epiphytic; Lima bean
N.D.
-0.8
+0.3
+0.3
+0.6
stress
KB with Solanesol 10 mM
N.D.
-0.3
+0.4
+0.3
+0.1
stress
KB with Methyl-2-Hydroxy-Phenylproprionate 10 mM
N.D.
+0.3
+0.2
-0.4
+0.5
stress
KB with Isosafrole 10 mM
N.D.
+0.5
-0.1
-0.2
+0.4
stress
KB with Gossypol-Acetic Acid Complex 10 mM
N.D.
+0.2
+0.4
-0.2
+0.2
stress
KB with Sinomenine 10 mM
N.D.
+0.2
+0.2
-0.3
+0.5
kb
KB
N.D.
-0.2
+0.4
+0.1
+0.3
in planta
apoplastic, chopping recovery; Green bean
N.D.
+0.4
+0.3
+0.5
-0.1
stress
KB with Novobiocin 7.75 ug/ml
N.D.
+0.6
+0.3
+0.1
+0.1
in planta
apoplastic, chopping recovery; Green bean
N.D.
+0.8
+0.0
+0.2
+0.1
in planta
apoplastic, chopping recovery; Green bean
N.D.
+0.9
+0.1
+0.3
-0.2
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