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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2484 and Psyr_2485 overlap by 4 nucleotides
Psyr_2485 and Psyr_2486 are separated by 169 nucleotides
Psyr_2486 and Psyr_2487 are separated by 111 nucleotides
Psyr_2487 and Psyr_2488 are separated by 44 nucleotides
Psyr_2484: Psyr_2484 - Acriflavin resistance protein, at 2,883,883 to 2,886,990
_2484
Psyr_2485: Psyr_2485 - RND efflux system, outer membrane lipoprotein, NodT, at 2,886,987 to 2,888,450
_2485
Psyr_2486: Psyr_2486 - diguanylate cyclase/phosphodiesterase, at 2,888,620 to 2,890,731
_2486
Psyr_2487: Psyr_2487 - Short-chain dehydrogenase/reductase SDR, at 2,890,843 to 2,891,589
_2487
Psyr_2488: Psyr_2488 - hypothetical protein, at 2,891,634 to 2,891,966
_2488
Group
Condition
Psyr
_2484
Psyr
_2485
Psyr
_2486
Psyr
_2487
Psyr
_2488
stress
KB with Rifampicin 0.1 mg/ml
-4.0
-4.2
+0.0
-0.1
N.D.
stress
KB with Novobiocin 7.75 ug/ml
-3.6
-3.4
-0.3
-0.3
N.D.
stress
KB with Palmatine 10 mM
-1.8
-4.0
-0.1
-0.5
N.D.
in planta
Green bean; epiphytic
-2.3
-2.2
-0.2
-0.2
N.D.
stress
KB with Berberine 15.6 ug/ml
-2.0
-2.6
+0.1
-0.3
N.D.
stress
KB with Carbenicillin 3.1 ug/ml
-1.9
-2.5
+0.0
-0.2
N.D.
in planta
Green bean; epiphytic
-1.8
-1.9
+0.2
-0.1
N.D.
stress
KB with Acriflavine 1.25 ug/ml
-1.3
-2.5
+0.1
+0.3
N.D.
stress
KB with Palmatine chloride 10 mM
-0.6
-2.5
-0.1
+0.2
N.D.
stress
KB with Chloramphenicol 1.55 ug/ml
-1.4
-1.1
+0.1
-0.2
N.D.
stress
KB with Usnic Acid 10 mM
-0.6
-1.7
-0.2
+0.1
N.D.
stress
KB with Harmine 10 mM
-0.6
-1.8
+0.2
-0.1
N.D.
stress
KB with Erythromycin 6.25 ug/ml
-1.0
-0.7
+0.1
-0.6
N.D.
stress
KB with Avocadyne 10 mM
-0.5
-1.6
+0.1
-0.0
N.D.
stress
KB with Phloretin 125 ug/ml
-0.8
-1.4
+0.2
-0.1
N.D.
stress
KB with Veratrine 10 mM
-0.7
-0.9
-0.2
-0.1
N.D.
stress
KB with Piperine 10 mM
-0.7
-1.0
+0.1
-0.2
N.D.
stress
KB with Acridine orange 3.125 ug/ml
-0.8
-0.4
+0.4
-0.9
N.D.
stress
KB with Oxedrine 10 mM
-0.8
-0.6
+0.2
-0.4
N.D.
stress
KB with L-alliin 10 mM
-0.3
-0.8
-0.2
-0.2
N.D.
in planta
apoplastic, chopping recovery; Green bean
-0.6
-0.8
-0.0
-0.1
N.D.
stress
KB with Benzalkonium chloride 1.55 ug/ml
-0.9
-0.9
+0.3
+0.1
N.D.
stress
KB with Levodopa 10 mM
-0.3
-0.9
+0.1
-0.2
N.D.
stress
KB with Chaulmoogric 10 mM
-1.0
-0.2
+0.2
-0.2
N.D.
stress
KB with Paclitaxel 10 mM
-0.7
-0.6
+0.2
-0.2
N.D.
stress
KB with Quercetin 360 ug/ml
-0.6
-1.0
+0.1
+0.4
N.D.
stress
KB with Oxonitine 10 mM
+0.4
-1.2
-0.2
+0.1
N.D.
stress
KB with Auraptene 10 mM
-0.4
-0.8
+0.1
+0.2
N.D.
stress
KB with Gamma-Aminobutyric Acid Hydrochloride 10 mM
+0.0
-0.9
-0.1
+0.4
N.D.
stress
KB with Strychnine Sulfate 10 mM
+0.1
-0.9
-0.1
+0.5
N.D.
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