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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2466 and Psyr_2467 are separated by 96 nucleotides
Psyr_2467 and Psyr_2468 overlap by 4 nucleotides
Psyr_2468 and Psyr_2469 are separated by 14 nucleotides
Psyr_2469 and Psyr_2470 are separated by 13 nucleotides
Psyr_2466: Psyr_2466 - HesB/YadR/YfhF:Nitrogen-fixing NifU, C-terminal, at 2,858,125 to 2,858,718
_2466
Psyr_2467: Psyr_2467 - 3-methylcrotonoyl-CoA carboxylase, alpha subunit, at 2,858,815 to 2,860,764
_2467
Psyr_2468: Psyr_2468 - Enoyl-CoA hydratase/isomerase, at 2,860,761 to 2,861,636
_2468
Psyr_2469: Psyr_2469 - Propionyl-CoA carboxylase, at 2,861,651 to 2,863,258
_2469
Psyr_2470: Psyr_2470 - isovaleryl-CoA dehydrogenase, at 2,863,272 to 2,864,435
_2470
Group
Condition
Psyr
_2466
Psyr
_2467
Psyr
_2468
Psyr
_2469
Psyr
_2470
stress
KB with Trimethoprim 15.6 ug/ml
N.D.
+0.5
-0.9
-0.1
-0.1
in planta
apoplastic; Green bean; 6 days
N.D.
+0.2
+0.6
-0.2
+0.5
stress
KB with Carbenicillin 3.1 ug/ml
N.D.
+0.4
+1.2
-0.2
-0.2
stress
KB with Prenyletin 10 mM
N.D.
+0.2
+1.0
+0.3
-0.1
stress
KB with L-alliin 10 mM
N.D.
+0.4
+0.6
+0.2
+0.2
kb
KB
N.D.
+0.5
+0.4
+0.4
+0.1
stress
KB with Solanesol 10 mM
N.D.
+0.3
+0.6
+0.4
+0.2
stress
KB with Lupeol 10 mM
N.D.
+0.6
+0.5
+0.1
+0.2
stress
KB with Conessine 10 mM
N.D.
+0.5
+0.6
+0.1
+0.2
stress
KB with Hydrastine (1R, 9S) 10 mM
N.D.
+0.5
+0.6
+0.2
+0.1
stress
KB with Piperine 10 mM
N.D.
+0.2
+0.8
+0.1
+0.3
stress
KB with Diallyl sulfide 10 mM
N.D.
+0.4
+0.3
+0.5
+0.4
stress
KB with Avocadyne 10 mM
N.D.
+0.5
+0.6
+0.0
+0.4
stress
KB with Piperic 10 mM
N.D.
+0.3
+0.9
-0.1
+0.4
stress
KB with Dimethyl Sulfoxide 1.25 vol%
N.D.
+0.5
+0.5
+0.2
+0.5
kb
KB
N.D.
+0.5
+0.7
+0.2
+0.3
stress
KB with Sclareolide 10 mM
N.D.
+0.6
+0.4
+0.3
+0.2
stress
KB with Emodin 10 mM
N.D.
+0.6
+0.5
+0.3
+0.3
stress
KB with d-limonene 10 mM
N.D.
+0.4
+1.0
+0.4
+0.0
stress
KB with Palmatine 10 mM
N.D.
+0.3
+0.9
+0.3
+0.2
stress
KB with Totarol 10 mM
N.D.
+0.8
+0.7
+0.3
+0.1
stress
KB with Helenine 10 mM
N.D.
+0.7
+0.6
+0.3
+0.2
stress
KB with Paclitaxel 10 mM
N.D.
+0.5
+0.8
+0.4
+0.3
stress
KB with Veratrine 10 mM
N.D.
+0.2
+1.0
+0.4
+0.4
stress
KB with Nonanoic 10 mM
N.D.
+0.5
+1.0
+0.1
+0.3
stress
KB with Gossypetin 10 mM
N.D.
+0.5
+1.0
+0.1
+0.4
stress
KB with Lawsone 10 mM
N.D.
+0.3
+0.9
+0.4
+0.4
stress
KB with Levodopa 10 mM
N.D.
+0.5
+0.9
+0.2
+0.5
stress
KB with Anethole 10 mM
N.D.
+0.6
+1.0
+0.2
+0.4
stress
KB with Curcumin 10 mM
N.D.
+0.6
+1.0
+0.3
+0.4
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