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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2405 and Psyr_2406 are separated by 175 nucleotides
Psyr_2406 and Psyr_2407 are separated by 13 nucleotides
Psyr_2407 and Psyr_2408 overlap by 4 nucleotides
Psyr_2408 and Psyr_2409 are separated by 34 nucleotides
Psyr_2405: Psyr_2405 - transcriptional regulator, GntR family, at 2,786,517 to 2,787,269
_2405
Psyr_2406: Psyr_2406 - Flavin reductase-like protein, at 2,787,445 to 2,787,930
_2406
Psyr_2407: Psyr_2407 - aldehyde dehydrogenase (acceptor), at 2,787,944 to 2,789,425
_2407
Psyr_2408: Psyr_2408 - 3-oxoadipate enol-lactonase, at 2,789,422 to 2,790,270
_2408
Psyr_2409: Psyr_2409 - Protein of unknown function DUF1185, at 2,790,305 to 2,790,895
_2409
Group
Condition
Psyr
_2405
Psyr
_2406
Psyr
_2407
Psyr
_2408
Psyr
_2409
stress
KB with Harmol 10 mM
+0.4
-1.6
+0.3
+0.2
-0.9
stress
KB with Benzalkonium chloride 1.55 ug/ml
-0.2
-1.0
+0.1
-0.3
-0.2
kb
KB
-0.0
-1.6
-0.1
-0.1
+0.4
stress
KB with Solanesol 10 mM
+0.2
-1.1
+0.0
+0.1
-0.4
stress
KB with Biochanin a diacetate 10 mM
+0.2
-1.4
+0.2
+0.0
+0.0
stress
KB with Berberine 15.6 ug/ml
+0.0
-0.5
+0.2
-0.8
+0.1
stress
KB with Chaulmoogric 10 mM
-0.3
-1.1
+0.2
+0.0
+0.4
in planta
epiphytic; Lima bean
-0.4
+0.1
+0.1
+0.2
-0.7
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.1
-1.4
+0.1
+0.1
+0.4
stress
KB with Nonanoic 10 mM
-0.1
-0.9
+0.1
-0.2
+0.5
stress
KB with Palmatine 10 mM
-0.0
-1.0
+0.1
+0.0
+0.4
stress
KB with Oxedrine 10 mM
-0.1
-1.0
+0.2
-0.0
+0.5
stress
KB with Prenyletin 10 mM
+0.1
-1.2
-0.1
+0.2
+0.6
stress
KB with L-alliin 10 mM
+0.1
-1.1
+0.0
+0.2
+0.3
stress
KB with Veratrine 10 mM
-0.5
-0.3
+0.2
-0.2
+0.7
stress
KB with Piperic 10 mM
-0.5
-0.3
+0.1
+0.2
+0.5
stress
KB with Anethole 10 mM
+0.2
-0.6
+0.3
-0.2
+0.4
stress
KB with Novobiocin 7.75 ug/ml
-0.7
+0.5
+0.2
+0.4
-0.2
in planta
Green bean; epiphytic
-0.3
+0.9
-0.0
+0.0
-0.4
stress
KB with Gossypetin 10 mM
+0.3
-0.7
+0.3
-0.0
+0.5
stress
KB with Physcion 10 mM
+0.0
-0.9
+0.5
+0.1
+0.6
stress
KB with Chrysophanol 10 mM
+0.2
-0.7
+0.1
+0.2
+0.6
stress
KB with Palmatine chloride 10 mM
+0.1
-0.5
+0.1
+0.2
+0.6
stress
KB with Lawsone 10 mM
+0.5
-0.7
+0.2
+0.2
+0.4
stress
KB with Curcumin 10 mM
+0.5
-0.8
+0.4
+0.2
+0.5
stress
KB with Mitomycin C 0.05 ug/ml
-0.8
+0.6
+0.1
+1.0
-0.1
stress
KB with capsaicin 0.25 mg/ml
+0.1
+0.3
-0.3
+0.6
+0.2
stress
KB with Acridine orange 3.125 ug/ml
-0.2
+0.8
+0.3
+0.5
-0.2
stress
KB with Carbenicillin 3.1 ug/ml
-0.2
+1.1
+0.5
+0.3
-0.4
in planta
Green bean; epiphytic
+0.0
+0.8
+0.2
+0.1
+0.4
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