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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2307 and Psyr_2308 are separated by 129 nucleotides
Psyr_2308 and Psyr_2309 are separated by 63 nucleotides
Psyr_2309 and Psyr_2310 are separated by 291 nucleotides
Psyr_2310 and Psyr_2311 are separated by 97 nucleotides
Psyr_2307: Psyr_2307 - conserved hypothetical protein, at 2,683,144 to 2,683,365
_2307
Psyr_2308: Psyr_2308 - conserved hypothetical protein, at 2,683,495 to 2,683,698
_2308
Psyr_2309: Psyr_2309 - conserved hypothetical protein, at 2,683,762 to 2,684,304
_2309
Psyr_2310: Psyr_2310 - lipoprotein, putative, at 2,684,596 to 2,684,904
_2310
Psyr_2311: Psyr_2311 - conserved hypothetical protein, at 2,685,002 to 2,685,859
_2311
Group
Condition
Psyr
_2307
Psyr
_2308
Psyr
_2309
Psyr
_2310
Psyr
_2311
stress
KB with Mitomycin C 0.05 ug/ml
-1.0
N.D.
-0.1
-0.0
-0.5
stress
KB with Acridine orange 3.125 ug/ml
-1.3
N.D.
+0.2
+0.4
-0.3
stress
KB with Totarol 10 mM
-0.2
N.D.
-0.1
-0.8
+0.1
stress
KB with Novobiocin 7.75 ug/ml
-0.5
N.D.
-0.4
+0.1
+0.0
stress
KB with D-Salicin 240 ug/ml
+0.4
N.D.
-0.3
-0.2
-0.4
in planta
apoplastic; Green bean; 6 days
+0.2
N.D.
-0.2
-0.6
+0.1
stress
KB with Sinomenine 10 mM
-0.3
N.D.
+0.2
-0.4
+0.0
stress
KB with Carbenicillin 3.1 ug/ml
-0.4
N.D.
+0.1
+0.3
-0.3
stress
KB with Trimethoprim 15.6 ug/ml
+0.1
N.D.
-0.3
+0.2
-0.4
in planta
epiphytic; Lima bean
+0.1
N.D.
-1.1
+0.4
+0.2
stress
KB with Avocadene 10 mM
+0.2
N.D.
+0.3
-0.7
-0.1
kb
KB
+0.4
N.D.
-0.3
-0.2
-0.1
stress
KB with Curcumin 10 mM
+0.5
N.D.
-0.1
-0.7
+0.1
in planta
apoplastic; Green bean; 6 days
+0.5
N.D.
-0.4
-0.3
+0.1
stress
KB with L-alliin 10 mM
+0.3
N.D.
-0.6
+0.1
+0.3
stress
KB with Nonanoic 10 mM
+0.3
N.D.
-0.2
-0.2
+0.3
stress
KB with Quercetin 360 ug/ml
+0.3
N.D.
-0.2
+0.3
-0.2
stress
KB with Palmatine chloride 10 mM
+0.5
N.D.
-0.4
+0.3
-0.1
stress
KB with Chaulmoogric 10 mM
+0.4
N.D.
-0.3
-0.1
+0.4
in planta
epiphytic; Lima bean
-0.2
N.D.
-0.2
+0.3
+0.5
in planta
apoplastic, chopping recovery; Green bean
+0.3
N.D.
+0.2
+0.2
-0.4
stress
KB with Terpene 10 mM
+0.8
N.D.
-0.4
-0.2
+0.2
stress
KB with Avocadyne 10 mM
+0.5
N.D.
+0.0
-0.2
+0.1
stress
KB with Escin 10 mM
+0.4
N.D.
+0.3
-0.0
-0.2
stress
KB with Palmatine 10 mM
+0.8
N.D.
-0.1
-0.6
+0.4
in planta
apoplastic, chopping recovery; Green bean
+0.6
N.D.
+0.5
-0.2
-0.2
stress
KB with Emodin 10 mM
+0.6
N.D.
-0.2
+0.1
+0.2
stress
KB with Auraptene 10 mM
+0.4
N.D.
-0.3
+0.2
+0.5
stress
KB with Helenine 10 mM
+0.7
N.D.
-0.2
+0.1
+0.3
stress
KB with Harmine 10 mM
+0.4
N.D.
-0.4
+0.6
+0.4
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