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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2280 and Psyr_2281 are separated by 245 nucleotides
Psyr_2281 and Psyr_2282 are separated by 21 nucleotides
Psyr_2282 and Psyr_2283 are separated by 33 nucleotides
Psyr_2283 and Psyr_2284 are separated by 138 nucleotides
Psyr_2280: Psyr_2280 - Alkanesulfonate monooxygenase, at 2,647,447 to 2,648,547
_2280
Psyr_2281: Psyr_2281 - GGDEF domain protein, at 2,648,793 to 2,650,460
_2281
Psyr_2282: Psyr_2282 - Hydrophobe/amphiphile efflux-1 HAE1, at 2,650,482 to 2,653,625
_2282
Psyr_2283: Psyr_2283 - Secretion protein HlyD, at 2,653,659 to 2,654,819
_2283
Psyr_2284: Psyr_2284 - transcriptional regulator, LacI family, at 2,654,958 to 2,655,548
_2284
Group
Condition
Psyr
_2280
Psyr
_2281
Psyr
_2282
Psyr
_2283
Psyr
_2284
stress
KB with Palmatine chloride 10 mM
-1.0
+0.1
-2.1
-1.9
N.D.
stress
KB with Palmatine 10 mM
-0.3
-0.0
-2.2
-1.7
N.D.
stress
KB with Acriflavine 1.25 ug/ml
+0.5
-0.0
-2.3
-2.3
N.D.
stress
KB with Berberine 15.6 ug/ml
+0.1
-0.0
-1.9
-1.9
N.D.
stress
KB with Harmine 10 mM
+0.1
+0.4
-1.3
-1.1
N.D.
stress
KB with Veratrine 10 mM
-0.7
-0.6
-0.3
-0.2
N.D.
stress
KB with Piperine 10 mM
-0.5
-0.0
-0.2
-0.6
N.D.
stress
KB with Chloramphenicol 1.55 ug/ml
-0.3
+0.2
-0.5
-0.5
N.D.
stress
KB with Harmol Hydrochloride 10 mM
-0.0
-0.1
-0.3
-0.5
N.D.
stress
KB with Cotarnine Chloride 10 mM
+0.1
-0.1
-0.4
-0.5
N.D.
stress
KB with Erythromycin 6.25 ug/ml
+0.2
+0.2
-0.7
-0.6
N.D.
stress
KB with d-limonene 10 mM
-0.7
-0.0
+0.2
-0.3
N.D.
stress
KB with Chaulmoogric 10 mM
-0.8
-0.2
-0.0
+0.1
N.D.
stress
KB with Prenyletin 10 mM
-0.5
-0.3
+0.1
-0.1
N.D.
stress
KB with Chrysophanol 10 mM
-0.6
+0.1
-0.1
-0.1
N.D.
stress
KB with Benzalkonium chloride 1.55 ug/ml
+0.3
-0.3
-0.2
-0.3
N.D.
stress
KB with Novobiocin 7.75 ug/ml
-0.3
-0.4
-0.0
+0.2
N.D.
in planta
epiphytic; Lima bean
-0.4
-0.3
-0.2
+0.7
N.D.
stress
KB with Conessine 10 mM
-0.5
+0.2
-0.1
+0.1
N.D.
stress
KB with Nalidixic 0.775 ug/ml
-0.2
+0.5
-0.2
-0.3
N.D.
stress
KB with Diallyl sulfide 10 mM
-0.5
+0.3
-0.1
+0.0
N.D.
in planta
apoplastic; Green bean; 6 days
+0.2
-0.4
+0.2
-0.2
N.D.
stress
KB with Paclitaxel 10 mM
-0.4
+0.3
-0.2
+0.1
N.D.
in planta
epiphytic; Lima bean
-0.6
+0.4
-0.1
+0.2
N.D.
stress
KB with Quercetin 360 ug/ml
+0.5
-0.4
-0.2
+0.2
N.D.
stress
KB with Flavone 0.125 mg/ml
+0.3
+0.2
-0.3
+0.1
N.D.
stress
KB with Acridine orange 3.125 ug/ml
+0.3
+0.4
-0.2
-0.3
N.D.
in planta
apoplastic, chopping recovery; Green bean
+0.2
+0.2
+0.1
+0.4
N.D.
in planta
apoplastic, chopping recovery; Green bean
+0.1
+0.3
+0.2
+0.4
N.D.
in planta
apoplastic, chopping recovery; Green bean
+0.5
+0.2
+0.1
+0.3
N.D.
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