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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2272 and Psyr_2273 are separated by 288 nucleotides
Psyr_2273 and Psyr_2274 are separated by 150 nucleotides
Psyr_2274 and Psyr_2275 overlap by 4 nucleotides
Psyr_2275 and Psyr_2276 are separated by 15 nucleotides
Psyr_2272: Psyr_2272 - Helix-turn-helix motif protein, at 2,637,923 to 2,638,528
_2272
Psyr_2273: Psyr_2273 - L-glutamine synthetase, at 2,638,817 to 2,640,151
_2273
Psyr_2274: Psyr_2274 - glutamate synthase (NADPH) GltB1 subunit, at 2,640,302 to 2,641,222
_2274
Psyr_2275: Psyr_2275 - glutamate synthase (NADPH) GltB3 subunit, at 2,641,219 to 2,641,902
_2275
Psyr_2276: Psyr_2276 - glutamate synthase (NADPH) GltB2 subunit, at 2,641,918 to 2,643,258
_2276
Group
Condition
Psyr
_2272
Psyr
_2273
Psyr
_2274
Psyr
_2275
Psyr
_2276
in planta
apoplastic, chopping recovery; Green bean
-1.3
+0.3
-0.4
-0.1
-0.6
in planta
apoplastic, chopping recovery; Green bean
-1.2
+0.3
-0.3
-0.1
-0.5
kb
KB
-0.1
-0.7
-0.3
-0.6
-0.1
stress
KB with 4-hydroxychalcone 10 mM
-0.8
-0.5
-0.1
-0.2
+0.1
stress
KB with Totarol 10 mM
-0.4
-0.6
-0.2
-0.5
+0.1
stress
KB with Chloramphenicol 1.55 ug/ml
+0.2
-0.4
-0.0
-0.8
-0.3
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.5
-0.4
-0.3
-0.2
+0.3
stress
KB with Chrysophanol 10 mM
-0.9
-0.1
-0.0
-0.5
+0.4
stress
KB with Anethole 10 mM
-0.5
-0.5
-0.0
-0.2
+0.3
stress
KB with Ampicillin 0.775 ug/ml
-0.2
+0.3
+0.2
-0.7
-0.5
in planta
apoplastic, chopping recovery; Green bean
-1.1
+0.4
+0.0
+0.2
-0.3
kb
KB
+0.5
-0.1
-0.1
-0.5
-0.3
stress
KB with Trimethoprim 15.6 ug/ml
+0.3
-0.0
+0.2
-0.7
-0.3
stress
KB with Rotenone 0.125 mg/ml
+0.3
-0.0
-0.6
-0.3
+0.2
stress
KB with Veratrine 10 mM
-0.3
-0.2
-0.1
-0.3
+0.5
stress
KB with Carbenicillin 3.1 ug/ml
+0.5
-0.3
-0.2
-0.6
+0.3
in planta
apoplastic, chopping recovery; Green bean
-0.6
+0.5
-0.0
+0.5
-0.7
stress
KB with Palmatine 10 mM
-0.1
-0.2
+0.3
-0.8
+0.6
in planta
apoplastic; Green bean; 6 days
-0.2
+0.1
+0.5
-0.2
-0.4
stress
KB with Gossypetin 10 mM
+0.1
-0.4
-0.0
-0.4
+0.5
stress
KB with Nitrofurantoin 0.0625 mg/ml
+0.1
-0.0
-0.2
-0.6
+0.5
stress
KB with Phloretin 125 ug/ml
+0.3
-0.0
+0.3
+0.0
-0.8
in planta
epiphytic; Lima bean
-0.4
-0.1
-0.3
+0.1
+0.6
stress
KB with Erythromycin 6.25 ug/ml
+0.5
+0.1
+0.2
-0.6
-0.2
stress
KB with Oxedrine 10 mM
+0.4
-0.1
+0.5
-0.7
+0.0
stress
KB with Levodopa 10 mM
+0.5
-0.3
+0.1
-0.5
+0.4
stress
KB with Rifampicin 0.1 mg/ml
+0.3
+0.3
-0.3
-0.2
+0.5
stress
KB with Methyl-2-Hydroxy-Phenylproprionate 10 mM
+0.0
+0.4
-0.3
+0.6
-0.1
stress
KB with Acridine orange 3.125 ug/ml
+0.1
-0.2
+0.5
+1.0
+0.4
stress
KB with Mitomycin C 0.05 ug/ml
+0.3
+0.2
-0.0
+0.7
+0.7
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Psyr_2274
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