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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2229 and Psyr_2230 are separated by 188 nucleotides
Psyr_2230 and Psyr_2231 are separated by 160 nucleotides
Psyr_2231 and Psyr_2232 are separated by 6 nucleotides
Psyr_2232 and Psyr_2233 are separated by 60 nucleotides
Psyr_2229: Psyr_2229 - TonB-dependent siderophore receptor, at 2,590,553 to 2,592,664
_2229
Psyr_2230: Psyr_2230 - Mn2+/Fe2+ transporter, NRAMP family, at 2,592,853 to 2,594,154
_2230
Psyr_2231: Psyr_2231 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase, at 2,594,315 to 2,595,064
_2231
Psyr_2232: Psyr_2232 - Major facilitator superfamily, at 2,595,071 to 2,596,369
_2232
Psyr_2233: Psyr_2233 - Protein of unknown function DUF1289, at 2,596,430 to 2,596,612
_2233
Group
Condition
Psyr
_2229
Psyr
_2230
Psyr
_2231
Psyr
_2232
Psyr
_2233
stress
KB with capsaicin 0.125 mg/ml
-0.2
-0.1
-0.2
-0.6
N.D.
in planta
epiphytic; Lima bean
+0.1
-0.3
-1.0
+0.2
N.D.
stress
KB with Phloretin 125 ug/ml
-0.2
-0.3
-0.4
+0.0
N.D.
stress
KB with Tetracycline 0.0015 ug/ml
-0.0
-0.4
-0.5
-0.0
N.D.
stress
KB with Benzalkonium chloride 1.55 ug/ml
+0.2
-0.3
-0.4
-0.2
N.D.
stress
KB with Berberine 15.6 ug/ml
-0.4
-0.1
+0.0
-0.4
N.D.
stress
KB with Novobiocin 7.75 ug/ml
-0.1
-0.4
-0.4
+0.1
N.D.
in planta
apoplastic, chopping recovery; Green bean
-0.1
-0.3
-0.4
+0.0
N.D.
in planta
epiphytic; Lima bean
-0.0
-0.3
-0.9
+0.6
N.D.
stress
KB with Conessine 10 mM
-0.1
+0.1
-0.1
-0.5
N.D.
stress
KB with L-alliin 10 mM
-0.2
+0.2
-0.4
-0.0
N.D.
stress
KB with Piperic 10 mM
-0.1
+0.1
+0.1
-0.4
N.D.
stress
KB with 4-acetoxyphenol 10 mM
-0.1
-0.2
+0.2
-0.4
N.D.
stress
KB with Terpene 10 mM
-0.0
-0.0
+0.2
-0.5
N.D.
stress
KB with Mitomycin C 0.05 ug/ml
-0.0
-0.0
+0.3
-0.4
N.D.
stress
KB with Nonanoic 10 mM
-0.1
+0.2
+0.1
-0.4
N.D.
stress
KB with Escin 10 mM
+0.1
-0.1
+0.3
-0.3
N.D.
stress
KB with Lupeol 10 mM
-0.0
+0.2
+0.2
-0.4
N.D.
stress
KB with Anethole 10 mM
-0.2
+0.2
+0.3
-0.3
N.D.
stress
KB with Cotarnine Chloride 10 mM
+0.2
+0.1
-0.1
-0.3
N.D.
stress
KB with Nitrofurantoin 31.25 ug/ml
-0.2
+0.0
+0.5
-0.3
N.D.
in planta
Green bean; epiphytic
+0.1
+0.1
+0.2
-0.3
N.D.
stress
KB with Acridine orange 3.125 ug/ml
+0.3
-0.1
+0.2
-0.3
N.D.
stress
KB with Palmatine 10 mM
-0.2
+0.5
-0.1
+0.1
N.D.
stress
KB with Sclareolide 10 mM
-0.2
+0.2
+0.3
-0.1
N.D.
stress
KB with Chrysophanol 10 mM
+0.1
+0.1
-0.3
+0.4
N.D.
stress
KB with Totarol 10 mM
-0.0
+0.3
+0.5
-0.4
N.D.
stress
KB with Levodopa 10 mM
-0.1
+0.1
+0.5
+0.0
N.D.
stress
KB with Chaulmoogric 10 mM
-0.0
+0.3
+0.2
+0.3
N.D.
stress
KB with Diallyl sulfide 10 mM
-0.0
+0.4
+0.2
+0.3
N.D.
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