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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2177 and Psyr_2178 overlap by 13 nucleotides
Psyr_2178 and Psyr_2179 are separated by 554 nucleotides
Psyr_2179 and Psyr_2180 are separated by 505 nucleotides
Psyr_2180 and Psyr_2181 are separated by 145 nucleotides
Psyr_2177: Psyr_2177 - probable sulfopyruvate decarboxylase, at 2,530,564 to 2,531,160
_2177
Psyr_2178: Psyr_2178 - conserved hypothetical protein, at 2,531,148 to 2,531,687
_2178
Psyr_2179: Psyr_2179 - General substrate transporter:Major facilitator superfamily, at 2,532,242 to 2,533,618
_2179
Psyr_2180: Psyr_2180 - transcriptional regulator, LysR family, at 2,534,124 to 2,535,047
_2180
Psyr_2181: Psyr_2181 - Major facilitator superfamily, at 2,535,193 to 2,536,302
_2181
Group
Condition
Psyr
_2177
Psyr
_2178
Psyr
_2179
Psyr
_2180
Psyr
_2181
in planta
apoplastic, chopping recovery; Green bean
+0.1
-1.5
-0.3
-0.1
+0.0
stress
KB with Nitrofurantoin 0.0625 mg/ml
-0.2
-0.6
-0.2
-0.5
-0.0
stress
KB with Quercetin 360 ug/ml
-0.2
-0.1
+0.0
-1.2
+0.2
in planta
apoplastic, chopping recovery; Green bean
+0.4
-1.4
-0.4
+0.1
-0.0
stress
KB with Auraptene 10 mM
-0.3
-1.4
+0.0
+0.1
+0.3
in planta
apoplastic, chopping recovery; Green bean
+0.4
-1.3
-0.2
+0.1
+0.1
stress
KB with Carbenicillin 3.1 ug/ml
+0.5
-1.3
-0.0
-0.2
+0.1
stress
KB with Harmol 10 mM
-0.4
+0.1
+0.1
-0.9
+0.2
stress
KB with Totarol 10 mM
-0.5
-1.1
+0.0
+0.5
+0.2
stress
KB with Terpene 10 mM
-0.3
-0.3
+0.0
-0.5
+0.3
stress
KB with Paclitaxel 10 mM
-0.4
-0.5
-0.0
-0.1
+0.3
stress
KB with Diallyl sulfide 10 mM
-0.8
+0.3
+0.1
-0.4
+0.3
stress
KB with Piperine 10 mM
-0.3
-0.6
+0.0
+0.3
+0.1
in planta
apoplastic, chopping recovery; Green bean
+0.0
-0.8
-0.3
+0.3
+0.3
in planta
epiphytic; Lima bean
+0.4
-0.7
+0.0
+0.1
-0.2
kb
KB
-0.4
-0.5
+0.0
+0.3
+0.2
stress
KB with Physcion 10 mM
-0.5
-0.2
+0.2
-0.2
+0.3
stress
KB with Avocadyne 10 mM
-0.5
-0.2
-0.1
+0.3
+0.2
stress
KB with Lupeol 10 mM
-0.7
+0.0
+0.1
+0.2
+0.2
stress
KB with Biochanin a diacetate 10 mM
-0.3
-0.4
-0.1
+0.3
+0.3
stress
KB with Gossypetin 10 mM
-0.7
+0.1
+0.0
+0.3
+0.2
stress
KB with Mitomycin C 0.05 ug/ml
+0.4
+0.8
+0.1
-1.0
-0.4
stress
KB with Helenine 10 mM
-0.3
-0.4
+0.0
+0.5
+0.2
stress
KB with L-alliin 10 mM
-0.7
+0.3
+0.1
+0.1
+0.3
stress
KB with Lawsone 10 mM
-0.6
-0.0
+0.0
+0.7
+0.3
stress
KB with Escin 10 mM
+0.2
+0.6
+0.2
-0.5
-0.0
stress
KB with Solanesol 10 mM
-0.0
+0.8
+0.1
+0.3
-0.1
stress
KB with Acridine orange 3.125 ug/ml
+0.5
+1.2
-0.0
-0.1
-0.3
in planta
Green bean; epiphytic
-0.3
-0.1
-0.2
+2.3
+0.2
in planta
Green bean; epiphytic
+0.1
+0.5
-0.1
+2.4
-0.0
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