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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2170 and Psyr_2171 are separated by 373 nucleotides
Psyr_2171 and Psyr_2172 overlap by 4 nucleotides
Psyr_2172 and Psyr_2173 are separated by 25 nucleotides
Psyr_2173 and Psyr_2174 are separated by 0 nucleotides
Psyr_2170: Psyr_2170 - L-glutamate-binding protein / L-aspartate-binding protein, at 2,523,343 to 2,524,257
_2170
Psyr_2171: Psyr_2171 - HpcH/HpaI aldolase, at 2,524,631 to 2,525,446
_2171
Psyr_2172: Psyr_2172 - conserved hypothetical protein, at 2,525,443 to 2,526,288
_2172
Psyr_2173: Psyr_2173 - Electron transfer flavoprotein, alpha subunit, at 2,526,314 to 2,527,243
_2173
Psyr_2174: Psyr_2174 - Electron transfer flavoprotein beta-subunit, at 2,527,244 to 2,527,993
_2174
Group
Condition
Psyr
_2170
Psyr
_2171
Psyr
_2172
Psyr
_2173
Psyr
_2174
in planta
epiphytic; Lima bean
-0.2
-0.2
-0.7
-0.8
N.D.
stress
KB with Erythromycin 6.25 ug/ml
-0.5
-0.3
-0.3
-0.4
N.D.
stress
KB with Mitomycin C 0.05 ug/ml
-0.7
-0.5
-0.5
+0.5
N.D.
stress
KB with Trimethoprim 15.6 ug/ml
-0.5
+0.2
-0.6
-0.3
N.D.
stress
KB with Harmol 10 mM
-0.2
-1.1
-0.2
+0.5
N.D.
stress
KB with Veratrine 10 mM
-0.2
-0.2
-0.6
+0.1
N.D.
stress
KB with Benzalkonium chloride 1.55 ug/ml
-0.4
+0.1
-0.4
-0.3
N.D.
kb
KB
-0.3
+0.1
-0.5
-0.3
N.D.
stress
KB with Totarol 10 mM
-0.2
-0.5
-0.4
+0.3
N.D.
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.4
-0.3
-0.4
+0.2
N.D.
stress
KB with Avocadyne 10 mM
-0.4
-0.3
-0.4
+0.4
N.D.
stress
KB with 4-hydroxychalcone 10 mM
-0.3
-0.3
-0.3
+0.3
N.D.
stress
KB with Avocatin A 10 mM
-0.1
-0.4
-0.3
+0.3
N.D.
stress
KB with Palmatine 10 mM
-0.1
-0.2
-0.7
+0.5
N.D.
stress
KB with Escin 10 mM
-0.4
+0.5
-0.4
-0.0
N.D.
stress
KB with Lawsone 10 mM
-0.2
+0.1
-0.5
+0.4
N.D.
stress
KB with Hydrastine (1R, 9S) 10 mM
-0.2
-0.2
-0.4
+0.5
N.D.
in planta
apoplastic, chopping recovery; Green bean
-0.1
+0.7
-0.3
-0.3
N.D.
stress
KB with Carbenicillin 3.1 ug/ml
-0.6
+0.4
-0.3
+0.5
N.D.
kb
KB
-0.1
-0.2
-0.3
+0.6
N.D.
stress
KB with Sclareolide 10 mM
-0.2
-0.2
-0.3
+0.7
N.D.
stress
KB with Emodin 10 mM
-0.2
+0.1
-0.3
+0.5
N.D.
stress
KB with Quercetin 360 ug/ml
-0.1
+0.3
-0.4
+0.5
N.D.
stress
KB with Chaulmoogric 10 mM
-0.1
+0.3
-0.4
+0.5
N.D.
stress
KB with Avocadene 10 mM
-0.4
+0.3
+0.1
+0.4
N.D.
in planta
apoplastic, chopping recovery; Green bean
+0.0
+0.5
+0.3
-0.4
N.D.
stress
KB with Acridine orange 3.125 ug/ml
-0.5
+0.7
-0.0
+0.6
N.D.
in planta
apoplastic, chopping recovery; Green bean
+0.0
+1.0
-0.0
-0.3
N.D.
in planta
Green bean; epiphytic
+0.2
+0.7
-0.2
+0.1
N.D.
stress
KB with Methanol 5 vol%
-0.3
+0.5
+0.2
+0.4
N.D.
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