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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
1
2
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2121 and Psyr_2122 are separated by 141 nucleotides
Psyr_2122 and Psyr_2123 are separated by 11 nucleotides
Psyr_2123 and Psyr_2124 are separated by 87 nucleotides
Psyr_2124 and Psyr_2125 are separated by 24 nucleotides
Psyr_2121: Psyr_2121 - regulatory protein, LysR:LysR, substrate-binding protein, at 2,478,901 to 2,479,821
_2121
Psyr_2122: Psyr_2122 - protocatechuate 3,4-dioxygenase, beta subunit, at 2,479,963 to 2,480,682
_2122
Psyr_2123: Psyr_2123 - protocatechuate 3,4-dioxygenase, alpha subunit, at 2,480,694 to 2,481,296
_2123
Psyr_2124: Psyr_2124 - Benzoate transport, at 2,481,384 to 2,482,733
_2124
Psyr_2125: Psyr_2125 - 3-carboxy-cis,cis-muconate cycloisomerase, at 2,482,758 to 2,484,119
_2125
Group
Condition
Psyr
_2121
Psyr
_2122
Psyr
_2123
Psyr
_2124
Psyr
_2125
stress
KB with Avocadene 10 mM
-0.6
-0.7
-0.1
+0.0
N.D.
stress
KB with Emodin 10 mM
-0.8
-0.5
-0.1
-0.1
N.D.
stress
KB with Harmine 10 mM
-0.7
-0.3
-0.5
+0.3
N.D.
in planta
epiphytic; Lima bean
+0.2
-0.1
-0.8
-0.5
N.D.
stress
KB with Avocatin A 10 mM
-1.4
-0.3
+0.4
+0.2
N.D.
stress
KB with 4-hydroxychalcone 10 mM
-0.6
-0.5
+0.0
+0.1
N.D.
stress
KB with Physcion 10 mM
-0.4
-0.3
-0.5
+0.2
N.D.
stress
KB with Palmatine chloride 10 mM
-0.6
-0.7
+0.3
+0.1
N.D.
stress
KB with Hydrastine (1R, 9S) 10 mM
-0.3
-0.7
+0.1
+0.2
N.D.
kb
KB
-0.3
-0.6
-0.1
+0.3
N.D.
stress
KB with Conessine 10 mM
-0.5
-0.6
+0.3
+0.1
N.D.
stress
KB with Nonanoic 10 mM
-0.2
-0.4
-0.4
+0.2
N.D.
stress
KB with Dimethyl Sulfoxide 0.42 vol%
-0.3
+0.1
-0.4
-0.2
N.D.
stress
KB with Acriflavine 1.25 ug/ml
-0.2
-0.1
-0.6
+0.2
N.D.
stress
KB with Veratrine 10 mM
-0.4
-0.4
+0.2
-0.1
N.D.
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.2
-0.4
-0.3
+0.3
N.D.
stress
KB with Harmol 10 mM
-0.2
-0.5
-0.2
+0.4
N.D.
stress
KB with Curcumin 10 mM
-0.1
-0.6
+0.3
+0.0
N.D.
stress
KB with Novobiocin 7.75 ug/ml
-0.6
-0.1
+0.1
+0.2
N.D.
stress
KB with L-alliin 10 mM
-0.1
-0.5
+0.3
+0.1
N.D.
stress
KB with Lupeol 10 mM
+0.3
-0.4
-0.3
+0.2
N.D.
stress
KB with Chaulmoogric 10 mM
+0.1
-0.5
+0.3
-0.2
N.D.
stress
KB with 4-acetoxyphenol 10 mM
+0.3
-0.5
+0.1
+0.1
N.D.
in planta
epiphytic; Lima bean
+0.6
-0.2
-0.2
-0.1
N.D.
stress
KB with Gamma-Aminobutyric Acid Hydrochloride 10 mM
+0.4
-0.3
+0.2
-0.1
N.D.
stress
KB with Carbenicillin 3.1 ug/ml
-0.3
-0.2
+0.1
+0.5
N.D.
stress
KB with Benzalkonium chloride 1.55 ug/ml
-0.3
-0.2
+0.3
+0.4
N.D.
stress
KB with Erythromycin 6.25 ug/ml
-0.4
-0.2
+0.5
+0.3
N.D.
stress
KB with Mitomycin C 0.05 ug/ml
-0.0
-0.2
+0.5
+0.4
N.D.
stress
KB with Acridine orange 3.125 ug/ml
+0.1
+0.2
+0.2
+0.5
N.D.
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