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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2100 and Psyr_2101 are separated by 276 nucleotides
Psyr_2101 and Psyr_2102 are separated by 7 nucleotides
Psyr_2102 and Psyr_2103 are separated by 907 nucleotides
Psyr_2103 and Psyr_2104 are separated by 59 nucleotides
Psyr_2100: Psyr_2100 - assimilatory nitrate reductase (NADH) beta subunit, at 2,449,326 to 2,450,555
_2100
Psyr_2101: Psyr_2101 - Protein kinase, at 2,450,832 to 2,452,493
_2101
Psyr_2102: Psyr_2102 - Nitrate transporter, at 2,452,501 to 2,453,712
_2102
Psyr_2103: Psyr_2103 - levansucrase, at 2,454,620 to 2,455,867
_2103
Psyr_2104: Psyr_2104 - Response regulator receiver:ANTAR, at 2,455,927 to 2,456,502
_2104
Group
Condition
Psyr
_2100
Psyr
_2101
Psyr
_2102
Psyr
_2103
Psyr
_2104
stress
KB with Acridine orange 3.125 ug/ml
-0.7
+0.0
-0.3
-0.2
+0.3
in planta
apoplastic, chopping recovery; Green bean
-0.3
-0.1
+0.3
-0.5
+0.1
in planta
apoplastic, chopping recovery; Green bean
+0.2
+0.0
+0.3
-0.4
-0.1
stress
KB with 4-acetoxyphenol 10 mM
+0.1
-0.2
-0.2
+0.3
+0.2
in planta
Green bean; epiphytic
+0.2
+0.1
+0.2
+0.2
-0.3
stress
KB with Isosafrole 10 mM
+0.4
-0.1
-0.2
+0.1
+0.1
stress
KB with Benzalkonium chloride 1.55 ug/ml
+0.7
+0.1
-0.2
-0.0
-0.1
stress
KB with Totarol 10 mM
+0.3
-0.1
-0.1
+0.2
+0.2
stress
KB with Nalidixic 0.775 ug/ml
-0.2
+0.2
+0.4
+0.1
+0.1
stress
KB with Diallyl sulfide 10 mM
+0.4
+0.1
-0.2
+0.1
+0.2
stress
KB with Cantharidin 10 mM
+0.6
-0.1
-0.1
+0.1
+0.1
stress
KB with Berberine 15.6 ug/ml
+0.3
+0.1
+0.3
-0.2
+0.1
in planta
Green bean; epiphytic
+0.2
+0.1
+0.4
+0.3
-0.3
stress
KB with Terpene 10 mM
+0.1
+0.1
-0.1
+0.3
+0.4
stress
KB with Helenine 10 mM
+0.3
+0.1
+0.1
-0.1
+0.4
stress
KB with Quercetin 360 ug/ml
+0.3
+0.2
+0.2
+0.2
-0.2
stress
KB with Piperine 10 mM
+0.3
+0.1
-0.2
+0.1
+0.4
stress
KB with Veratrine 10 mM
+0.4
+0.1
-0.1
+0.3
+0.1
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.5
+0.1
-0.0
+0.2
+0.0
stress
KB with Piperacillin 0.775 ug/ml
+0.4
+0.1
+0.2
-0.0
+0.1
in planta
epiphytic; Lima bean
+0.4
+0.1
+0.2
-0.1
+0.2
stress
KB with Avocadyne 10 mM
+0.3
+0.0
+0.1
+0.1
+0.3
stress
KB with Escin 10 mM
+0.1
+0.1
+0.6
+0.0
-0.0
kb
KB
+0.4
+0.1
-0.0
+0.3
+0.2
kb
KB
+0.3
+0.2
+0.4
+0.1
+0.0
stress
KB with Palmatine 10 mM
+0.4
+0.0
+0.1
-0.0
+0.4
stress
KB with Phloretin 125 ug/ml
+0.2
+0.1
+0.2
+0.2
+0.2
stress
KB with Acriflavine 1.25 ug/ml
+0.6
+0.1
+0.4
+0.1
-0.1
stress
KB with Flavone 0.125 mg/ml
+0.4
+0.2
+0.2
+0.4
-0.0
stress
KB with Carbenicillin 3.1 ug/ml
+0.0
+0.2
+0.5
+0.1
+0.4
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