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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2082 and Psyr_2083 are separated by 4 nucleotides
Psyr_2083 and Psyr_2084 are separated by 297 nucleotides
Psyr_2084 and Psyr_2085 overlap by 4 nucleotides
Psyr_2085 and Psyr_2086 are separated by 159 nucleotides
Psyr_2082: Psyr_2082 - membrane protein, putative, at 2,427,303 to 2,428,838
_2082
Psyr_2083: Psyr_2083 - Protein of unknown function DUF785, at 2,428,843 to 2,429,379
_2083
Psyr_2084: Psyr_2084 - transcriptional regulator, GntR family, at 2,429,677 to 2,430,396
_2084
Psyr_2085: Psyr_2085 - methylisocitrate lyase, at 2,430,393 to 2,431,286
_2085
Psyr_2086: Psyr_2086 - 2-methylcitrate synthase, at 2,431,446 to 2,432,573
_2086
Group
Condition
Psyr
_2082
Psyr
_2083
Psyr
_2084
Psyr
_2085
Psyr
_2086
stress
KB with Veratrine 10 mM
-0.0
-0.5
-0.6
-0.2
-0.7
stress
KB with Tetracycline 0.0015 ug/ml
-0.5
-0.4
-0.1
-0.4
-0.5
stress
KB with Carbenicillin 3.1 ug/ml
+0.1
-0.6
-0.6
-0.9
+0.4
in planta
epiphytic; Lima bean
+0.1
+0.1
-1.0
-0.3
-0.5
stress
KB with Erythromycin 6.25 ug/ml
-0.1
+0.2
-0.4
-0.4
-0.8
stress
KB with Mitomycin C 0.05 ug/ml
+0.1
+0.1
-1.4
+0.6
-0.8
in planta
apoplastic, chopping recovery; Green bean
-0.3
-0.2
-0.0
-0.7
-0.1
stress
KB with Acridine orange 3.125 ug/ml
+0.2
-0.3
-1.0
+0.2
-0.4
stress
KB with Nalidixic 0.775 ug/ml
-0.3
-0.2
-0.1
-0.6
+0.0
stress
KB with Nitrofurantoin 31.25 ug/ml
-0.0
-0.2
-0.7
-0.4
+0.3
kb
KB
-0.0
+0.3
-0.4
-0.4
-0.3
in planta
epiphytic; Lima bean
+0.0
-0.1
-0.7
-0.4
+0.4
stress
KB with Escin 10 mM
+0.4
-0.2
-0.2
+0.1
-1.0
stress
KB with 4-hydroxychalcone 10 mM
-0.1
+0.6
-0.3
-0.5
-0.4
stress
KB with Hydrastine (1R, 9S) 10 mM
+0.1
+0.2
-0.2
-0.1
-0.7
stress
KB with Novobiocin 7.75 ug/ml
+0.1
+0.3
-0.2
+0.2
-1.1
in planta
Green bean; epiphytic
-0.1
-0.0
-0.2
-0.6
+0.3
stress
KB with D-Salicin 240 ug/ml
-0.0
+0.2
-0.6
+0.2
-0.4
in planta
Green bean; epiphytic
-0.1
-0.0
-0.1
-0.7
+0.3
stress
KB with Palmatine 10 mM
+0.5
+0.2
+0.0
+0.0
-1.2
stress
KB with Piperine 10 mM
-0.0
+0.5
-0.5
-0.1
-0.4
stress
KB with Nonanoic 10 mM
+0.3
+0.4
-0.5
-0.4
-0.3
stress
KB with Berberine 15.6 ug/ml
-0.4
+0.1
+0.4
-0.2
-0.2
stress
KB with Harmol 10 mM
+0.2
+0.0
+0.3
+0.0
-0.8
stress
KB with Emodin 10 mM
-0.2
+0.2
-0.6
+0.3
+0.0
stress
KB with Oxedrine 10 mM
+0.3
-0.2
+0.0
+0.3
-0.6
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.3
+0.5
+0.2
+0.0
-0.5
stress
KB with Terpene 10 mM
+0.1
+0.6
-0.5
-0.2
-0.1
stress
KB with Benzalkonium chloride 1.55 ug/ml
+0.2
+0.2
-0.5
+0.5
-0.4
stress
KB with Harmine 10 mM
-0.3
+0.5
+0.1
+0.1
-0.3
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