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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_2036 and Psyr_2037 are separated by 46 nucleotides
Psyr_2037 and Psyr_2038 are separated by 37 nucleotides
Psyr_2038 and Psyr_2039 are separated by 107 nucleotides
Psyr_2039 and Psyr_2040 are separated by 361 nucleotides
Psyr_2036: Psyr_2036 - Fimbrial protein, at 2,363,731 to 2,364,846
_2036
Psyr_2037: Psyr_2037 - Fimbrial biogenesis outer membrane usher protein, at 2,364,893 to 2,367,406
_2037
Psyr_2038: Psyr_2038 - pili assembly chaperone:Bacterial pili assembly chaperone, at 2,367,444 to 2,368,190
_2038
Psyr_2039: Psyr_2039 - Fimbrial protein, at 2,368,298 to 2,368,849
_2039
Psyr_2040: Psyr_2040 - YD repeat protein, at 2,369,211 to 2,374,259
_2040
Group
Condition
Psyr
_2036
Psyr
_2037
Psyr
_2038
Psyr
_2039
Psyr
_2040
stress
KB with Erythromycin 6.25 ug/ml
+0.1
+0.2
-2.1
-0.1
+0.1
in planta
epiphytic; Lima bean
+0.2
-0.1
-0.7
-0.7
-0.0
stress
KB with Tetracycline 0.0015 ug/ml
+0.2
+0.2
-1.2
-0.4
+0.0
stress
KB with Mitomycin C 0.05 ug/ml
+0.2
-0.0
-0.3
-0.8
+0.0
stress
KB with Acridine orange 3.125 ug/ml
+0.1
-0.1
-0.1
-0.7
+0.1
stress
KB with Novobiocin 7.75 ug/ml
+0.0
+0.2
-0.9
+0.0
+0.1
stress
KB with Phloretin 125 ug/ml
+0.4
+0.2
-0.8
-0.1
-0.0
stress
KB with Acriflavine 1.25 ug/ml
+0.3
+0.1
-0.6
+0.1
-0.1
stress
KB with Sclareolide 10 mM
+0.0
+0.3
-0.6
+0.2
+0.0
stress
KB with Carbenicillin 3.1 ug/ml
+0.4
+0.1
-0.6
+0.1
+0.0
stress
KB with Quercetin 360 ug/ml
+0.0
+0.2
-0.7
+0.3
+0.2
stress
KB with Chaulmoogric 10 mM
+0.4
+0.2
-0.4
+0.2
+0.0
stress
KB with Avocadyne 10 mM
+0.2
+0.3
-0.4
+0.4
-0.0
kb
KB
+0.3
+0.3
-0.3
+0.1
+0.0
stress
KB with Conessine 10 mM
+0.3
+0.4
-0.5
+0.1
+0.1
stress
KB with Biochanin a diacetate 10 mM
+0.3
+0.3
-0.2
+0.3
-0.1
stress
KB with Piperine 10 mM
+0.3
+0.3
-0.2
+0.2
+0.1
stress
KB with Usnic Acid 10 mM
+0.4
+0.1
+0.3
-0.2
-0.1
stress
KB with 4-hydroxychalcone 10 mM
+0.2
+0.3
-0.3
+0.4
+0.1
stress
KB with Paclitaxel 10 mM
+0.4
+0.2
-0.2
+0.2
+0.0
in planta
epiphytic; Lima bean
+0.1
+0.0
+0.2
+0.4
-0.2
stress
KB with Harmol 10 mM
+0.2
+0.3
-0.2
+0.4
+0.2
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.3
+0.2
+0.3
-0.1
+0.1
stress
KB with Avocatin A 10 mM
+0.2
+0.3
-0.1
+0.3
+0.1
stress
KB with Physcion 10 mM
+0.2
+0.5
-0.1
+0.3
+0.0
stress
KB with Palmatine chloride 10 mM
+0.5
+0.3
-0.0
+0.3
-0.0
stress
KB with Diallyl sulfide 10 mM
+0.0
+0.2
+0.2
+0.5
+0.1
stress
KB with Prenyletin 10 mM
+0.4
+0.3
+0.1
+0.4
+0.1
stress
KB with d-limonene 10 mM
+0.3
+0.3
+0.2
+0.5
+0.1
stress
KB with Auraptene 10 mM
+0.5
+0.3
+0.2
+0.3
+0.1
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