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Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1988 and Psyr_1989 are separated by 12 nucleotides
Psyr_1989 and Psyr_1990 are separated by 326 nucleotides
Psyr_1990 and Psyr_1991 are separated by 79 nucleotides
Psyr_1991 and Psyr_1992 are separated by 11 nucleotides
Psyr_1988: Psyr_1988 - 2-keto-3-deoxy-phosphogalactonate aldolase, at 2,308,408 to 2,309,043
_1988
Psyr_1989: Psyr_1989 - galactonate dehydratase, at 2,309,056 to 2,310,261
_1989
Psyr_1990: Psyr_1990 - D-galactonate transporter, at 2,310,588 to 2,311,898
_1990
Psyr_1991: Psyr_1991 - transcriptional regulator, IclR family, at 2,311,978 to 2,312,787
_1991
Psyr_1992: Psyr_1992 - Zinc-containing alcohol dehydrogenase superfamily, at 2,312,799 to 2,313,851
_1992
Group
Condition
Psyr
_1988
Psyr
_1989
Psyr
_1990
Psyr
_1991
Psyr
_1992
stress
KB with Oxonitine 10 mM
N.D.
-0.9
-0.5
-0.1
-0.5
in planta
epiphytic; Lima bean
N.D.
+0.6
-0.6
+0.4
-2.3
stress
KB with Berberine 15.6 ug/ml
N.D.
-0.3
-0.3
-0.1
-0.9
stress
KB with Novobiocin 7.75 ug/ml
N.D.
-0.5
-0.1
-0.2
-0.8
stress
KB with Flavone 0.125 mg/ml
N.D.
-0.9
-0.2
-0.4
-0.1
stress
KB with Harmol Hydrochloride 10 mM
N.D.
-0.2
-0.2
-0.2
-0.9
stress
KB with Methyl-2-Hydroxy-Phenylproprionate 10 mM
N.D.
-0.3
-0.3
-0.3
-0.5
stress
KB with Hydrastine (1R, 9S) 10 mM
N.D.
-1.0
+0.1
-0.3
-0.2
stress
KB with Acriflavine 1.25 ug/ml
N.D.
-1.0
-0.1
-0.3
+0.1
stress
KB with Cotarnine Chloride 10 mM
N.D.
-0.4
-0.4
-0.3
-0.1
stress
KB with Acridine orange 3.125 ug/ml
N.D.
-0.4
+0.3
-0.6
-0.5
kb
KB
N.D.
-0.5
-0.1
+0.2
-0.8
stress
KB with Gamma-Aminobutyric Acid Hydrochloride 10 mM
N.D.
-0.7
-0.0
-0.4
+0.0
stress
KB with Rifampicin 0.1 mg/ml
N.D.
-0.9
-0.1
-0.1
+0.2
stress
KB with Escin 10 mM
N.D.
-1.0
+0.1
+0.2
-0.3
kb
KB
N.D.
-1.0
-0.1
-0.2
+0.3
stress
KB with Rotenone 0.25 mg/ml
N.D.
-0.8
-0.1
-0.1
+0.2
stress
KB with Tetracycline 0.0015 ug/ml
N.D.
-0.7
-0.1
-0.3
+0.4
stress
KB with Benzalkonium chloride 1.55 ug/ml
N.D.
-0.3
+0.2
+0.0
-0.7
stress
KB with Oxedrine 10 mM
N.D.
-0.8
-0.1
+0.3
+0.1
stress
KB with Nitrofurantoin 31.25 ug/ml
N.D.
-0.5
-0.2
-0.3
+0.6
kb
KB
N.D.
-0.5
-0.2
-0.1
+0.4
stress
KB with Palmatine 10 mM
N.D.
-0.1
+0.3
+0.3
-0.7
stress
KB with Solanesol 10 mM
N.D.
+0.1
+0.3
+0.1
-0.7
stress
KB with Isosafrole 10 mM
N.D.
-0.3
-0.1
-0.3
+0.6
in planta
apoplastic, chopping recovery; Green bean
N.D.
-0.2
+0.1
-0.5
+0.4
stress
KB with Veratrine 10 mM
N.D.
-0.6
+0.3
+0.1
+0.3
stress
KB with Quercetin 360 ug/ml
N.D.
-0.2
-0.2
-0.4
+0.7
stress
KB with Nalidixic 0.775 ug/ml
N.D.
-0.6
-0.0
-0.2
+0.9
in planta
apoplastic; Green bean; 6 days
N.D.
-0.0
-0.0
+0.2
+1.0
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