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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1967 and Psyr_1968 are separated by 347 nucleotides
Psyr_1968 and Psyr_1969 are separated by 7 nucleotides
Psyr_1969 and Psyr_1970 are separated by 0 nucleotides
Psyr_1970 and Psyr_1971 are separated by 186 nucleotides
Psyr_1967: Psyr_1967 - Twin-arginine translocation pathway signal, at 2,279,123 to 2,280,757
_1967
Psyr_1968: Psyr_1968 - RND efflux system, outer membrane lipoprotein, NodT, at 2,281,105 to 2,282,493
_1968
Psyr_1969: Psyr_1969 - ABC transporter:Protein of unknown function DUF214, at 2,282,501 to 2,284,474
_1969
Psyr_1970: Psyr_1970 - Secretion protein HlyD, at 2,284,475 to 2,285,647
_1970
Psyr_1971: Psyr_1971 - Peptidase S45, penicillin amidase, at 2,285,834 to 2,288,173
_1971
Group
Condition
Psyr
_1967
Psyr
_1968
Psyr
_1969
Psyr
_1970
Psyr
_1971
stress
KB with Gossypol-Acetic Acid Complex 10 mM
+0.6
-0.7
-1.6
-1.2
+0.0
stress
KB with Quercetin 360 ug/ml
+0.2
-0.4
-1.8
-1.0
+0.2
stress
KB with Prenyletin 10 mM
-0.3
-1.9
+0.1
-0.1
-0.1
in planta
epiphytic; Lima bean
-0.2
-2.6
+0.2
+0.1
+0.3
stress
KB with Gossypetin 10 mM
-0.2
-0.8
-0.2
-0.6
+0.4
in planta
apoplastic; Green bean; 6 days
-0.4
-0.5
-0.1
-0.4
+0.1
stress
KB with 4-hydroxychalcone 10 mM
-0.2
-1.0
-0.3
-0.1
+0.3
stress
KB with Palmatine 10 mM
+0.4
-1.1
+0.0
-0.4
-0.0
in planta
epiphytic; Lima bean
+0.3
-0.9
-0.8
+0.2
+0.1
stress
KB with Acriflavine 1.25 ug/ml
-0.3
+0.3
-0.6
-0.4
+0.0
stress
KB with Biochanin a diacetate 10 mM
-0.0
-1.2
+0.3
-0.0
+0.1
stress
KB with Harmol 10 mM
-0.6
+0.2
-0.0
-0.5
+0.3
stress
KB with Emodin 10 mM
-0.5
-0.8
+0.4
+0.2
+0.0
stress
KB with Auraptene 10 mM
-0.3
-1.1
+0.3
+0.4
+0.2
stress
KB with Mitomycin C 0.05 ug/ml
-0.4
-0.3
-0.2
+0.7
-0.0
stress
KB with Lawsone 10 mM
-0.1
-0.3
+0.4
-0.6
+0.2
stress
KB with Benzalkonium chloride 1.55 ug/ml
+0.1
+0.5
-0.8
-0.1
+0.0
stress
KB with Oxedrine 10 mM
-0.1
-0.7
-0.2
+0.6
+0.2
stress
KB with 4-acetoxyphenol 10 mM
-0.3
-0.5
+0.5
-0.2
+0.3
stress
KB with Conessine 10 mM
-0.1
-0.8
+0.3
+0.3
+0.2
stress
KB with Diallyl sulfide 10 mM
-0.5
-0.4
+0.4
+0.4
+0.2
stress
KB with Acridine orange 3.125 ug/ml
-0.3
-0.1
-0.3
+1.0
-0.1
stress
KB with Escin 10 mM
-0.6
+0.3
-0.1
+0.3
+0.3
stress
KB with Harmol Hydrochloride 10 mM
+0.1
-0.7
+0.1
+0.6
+0.3
stress
KB with Hydrastine (1R, 9S) 10 mM
-0.5
+0.3
+0.1
+0.4
+0.1
stress
KB with Totarol 10 mM
-0.1
-0.1
+0.8
-0.3
+0.2
kb
KB
-0.2
+0.6
+0.3
-0.2
+0.3
stress
KB with Berberine 15.6 ug/ml
+0.0
+0.8
+0.3
-0.3
-0.0
stress
KB with Methanol 5 vol%
+0.3
+0.7
-0.1
+0.3
+0.1
stress
KB with Carbenicillin 3.1 ug/ml
-0.3
+1.7
+0.1
+0.2
-0.1
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