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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1964 and Psyr_1965 are separated by 47 nucleotides
Psyr_1965 and Psyr_1966 overlap by 8 nucleotides
Psyr_1966 and Psyr_1967 are separated by 182 nucleotides
Psyr_1967 and Psyr_1968 are separated by 347 nucleotides
Psyr_1964: Psyr_1964 - Protein of unknown function DUF323, at 2,275,359 to 2,276,225
_1964
Psyr_1965: Psyr_1965 - Twin-arginine translocation pathway signal, at 2,276,273 to 2,277,553
_1965
Psyr_1966: Psyr_1966 - Peptidase M19, renal dipeptidase, at 2,277,546 to 2,278,940
_1966
Psyr_1967: Psyr_1967 - Twin-arginine translocation pathway signal, at 2,279,123 to 2,280,757
_1967
Psyr_1968: Psyr_1968 - RND efflux system, outer membrane lipoprotein, NodT, at 2,281,105 to 2,282,493
_1968
Group
Condition
Psyr
_1964
Psyr
_1965
Psyr
_1966
Psyr
_1967
Psyr
_1968
stress
KB with Gossypol-Acetic Acid Complex 10 mM
-0.7
-0.8
-3.0
+0.6
-0.7
stress
KB with Quercetin 360 ug/ml
-0.7
-1.1
-2.2
+0.2
-0.4
stress
KB with Prenyletin 10 mM
-0.2
-0.3
-1.3
-0.3
-1.9
in planta
epiphytic; Lima bean
-0.6
-0.2
+0.1
-0.2
-2.6
stress
KB with Auraptene 10 mM
-0.6
-0.3
-1.0
-0.3
-1.1
stress
KB with Piperic 10 mM
-0.2
-0.9
-1.5
+0.1
-0.8
stress
KB with Emodin 10 mM
-0.1
-0.3
-1.4
-0.5
-0.8
stress
KB with Palmatine 10 mM
-0.1
-0.5
-1.4
+0.4
-1.1
stress
KB with Curcumin 10 mM
-0.6
-0.8
-0.7
+0.0
-0.7
stress
KB with Biochanin a diacetate 10 mM
-0.2
-0.3
-0.8
-0.0
-1.2
stress
KB with Gossypetin 10 mM
-0.8
-0.6
-0.3
-0.2
-0.8
stress
KB with d-limonene 10 mM
-0.1
-0.3
-1.5
-0.0
-0.4
stress
KB with Helenine 10 mM
-0.4
-0.2
-1.1
-0.2
-0.3
stress
KB with Sclareolide 10 mM
-0.2
-0.3
-1.7
+0.1
+0.2
stress
KB with Lawsone 10 mM
-0.3
-0.7
-0.7
-0.1
-0.3
stress
KB with Palmatine chloride 10 mM
-0.3
-0.6
-0.6
-0.0
-0.4
stress
KB with Harmol 10 mM
-0.0
+0.0
-1.5
-0.6
+0.2
in planta
apoplastic, chopping recovery; Green bean
+0.1
-0.3
-1.1
-0.2
-0.4
kb
KB
-0.4
-0.4
-0.9
-0.2
+0.0
kb
KB
-0.4
-0.3
-1.0
-0.2
+0.2
stress
KB with Chrysophanol 10 mM
-0.5
-0.2
-1.1
-0.1
+0.2
stress
KB with Physcion 10 mM
-0.1
-0.4
-1.1
-0.3
+0.3
stress
KB with Hydrastine (1R, 9S) 10 mM
-0.5
-0.3
-0.5
-0.5
+0.3
stress
KB with Carbenicillin 3.1 ug/ml
-0.5
-1.0
-1.4
-0.3
+1.7
in planta
apoplastic, chopping recovery; Green bean
+0.1
-0.5
-1.0
-0.1
+0.1
stress
KB with 4-acetoxyphenol 10 mM
-0.6
-0.2
+0.3
-0.3
-0.5
stress
KB with 4-hydroxychalcone 10 mM
-0.3
+0.0
+0.5
-0.2
-1.0
stress
KB with Benzalkonium chloride 1.55 ug/ml
-0.5
-0.8
-0.1
+0.1
+0.5
stress
KB with Phloretin 125 ug/ml
-0.6
-0.1
-0.2
-0.3
+0.5
in planta
epiphytic; Lima bean
-0.4
-0.2
+0.7
+0.3
-0.9
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