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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1953 and Psyr_1954 overlap by 4 nucleotides
Psyr_1954 and Psyr_1955 overlap by 4 nucleotides
Psyr_1955 and Psyr_1956 are separated by 296 nucleotides
Psyr_1956 and Psyr_1957 are separated by 518 nucleotides
Psyr_1953: Psyr_1953 - conserved hypothetical protein, at 2,237,498 to 2,237,830
_1953
Psyr_1954: Psyr_1954 - conserved hypothetical protein, at 2,237,827 to 2,238,372
_1954
Psyr_1955: Psyr_1955 - Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix, at 2,238,369 to 2,239,592
_1955
Psyr_1956: Psyr_1956 - pyoverdine biosynthesis regulatory gene, putative, at 2,239,889 to 2,240,866
_1956
Psyr_1957: Psyr_1957 - Amino acid adenylation, at 2,241,385 to 2,244,795
_1957
Group
Condition
Psyr
_1953
Psyr
_1954
Psyr
_1955
Psyr
_1956
Psyr
_1957
stress
KB with Gossypol-Acetic Acid Complex 10 mM
-2.3
-2.0
-3.2
+0.0
+0.6
in planta
epiphytic; Lima bean
-0.2
-5.3
+0.3
-0.1
+0.1
stress
KB with Gossypetin 10 mM
-1.2
-1.6
-1.1
+0.1
+0.1
in planta
apoplastic, chopping recovery; Green bean
-2.2
-0.4
-0.2
-0.7
-0.1
stress
KB with Quercetin 360 ug/ml
-0.8
-1.7
-1.5
+0.3
+0.3
stress
KB with Erythromycin 6.25 ug/ml
+0.1
-1.8
-1.8
-0.2
+0.4
stress
KB with Nitrofurantoin 0.0625 mg/ml
-0.1
-1.6
-1.2
-0.2
-0.2
stress
KB with Phloretin 125 ug/ml
-0.1
-2.1
-0.9
-0.1
+0.1
stress
KB with Berberine 15.6 ug/ml
-0.2
-1.5
-1.6
+0.1
+0.2
stress
KB with Chloramphenicol 1.55 ug/ml
+0.1
-2.0
-1.3
+0.0
+0.2
stress
KB with Acriflavine 1.25 ug/ml
+0.1
-2.3
-1.2
+0.0
+0.4
in planta
apoplastic, chopping recovery; Green bean
-1.1
-0.2
-0.5
-1.0
-0.1
stress
KB with Harmol 10 mM
-0.0
-2.1
-0.6
-0.4
+0.4
stress
KB with Curcumin 10 mM
-0.5
-0.8
-1.5
-0.0
+0.4
stress
KB with Avocatin A 10 mM
-0.3
-1.2
-1.0
-0.1
+0.3
stress
KB with Palmatine 10 mM
-0.5
-1.5
-1.1
+0.1
+0.8
stress
KB with Harmine 10 mM
-0.1
-0.1
-1.9
-0.3
+0.2
stress
KB with Solanesol 10 mM
-0.1
-1.3
-0.9
-0.1
+0.3
stress
KB with Nitrofurantoin 31.25 ug/ml
+0.2
-0.8
-1.2
-0.3
-0.0
stress
KB with Acridine orange 3.125 ug/ml
+0.4
-1.4
-0.7
-0.4
+0.1
stress
KB with Lawsone 10 mM
-0.3
-1.3
-0.5
-0.2
+0.5
stress
KB with Piperine 10 mM
-0.1
-1.2
-0.8
-0.2
+0.5
stress
KB with Piperic 10 mM
-0.2
-1.4
-0.6
-0.0
+0.4
stress
KB with Hydrastine (1R, 9S) 10 mM
-0.7
-0.7
-0.6
-0.1
+0.3
stress
KB with Palmatine chloride 10 mM
+0.1
-1.6
-1.0
+0.2
+0.6
stress
KB with Emodin 10 mM
-0.6
-0.9
-0.2
-0.3
+0.4
stress
KB with Helenine 10 mM
-0.5
-0.9
-0.6
-0.1
+0.4
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.4
-1.1
-0.5
+0.1
+0.3
stress
KB with Avocadyne 10 mM
-0.2
-1.1
-0.7
-0.1
+0.5
stress
KB with Diallyl sulfide 10 mM
+0.5
-1.1
-0.8
-0.2
+0.3
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