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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1852 and Psyr_1853 are separated by 141 nucleotides
Psyr_1853 and Psyr_1854 are separated by 30 nucleotides
Psyr_1854 and Psyr_1855 overlap by 4 nucleotides
Psyr_1855 and Psyr_1856 are separated by 80 nucleotides
Psyr_1852: Psyr_1852 - conserved hypothetical protein, at 2,129,806 to 2,130,837
_1852
Psyr_1853: Psyr_1853 - chorismate synthase, at 2,130,979 to 2,132,070
_1853
Psyr_1854: Psyr_1854 - Major facilitator superfamily, at 2,132,101 to 2,133,264
_1854
Psyr_1855: Psyr_1855 - methylthioribulose-1-phosphate dehydratase, at 2,133,261 to 2,133,875
_1855
Psyr_1856: Psyr_1856 - acireductone dioxygenase apoprotein, at 2,133,956 to 2,134,501
_1856
Group
Condition
Psyr
_1852
Psyr
_1853
Psyr
_1854
Psyr
_1855
Psyr
_1856
stress
KB with d-limonene 10 mM
-1.5
N.D.
-0.1
-0.2
-0.2
stress
KB with Solanesol 10 mM
-0.9
N.D.
+0.0
-0.5
-0.5
stress
KB with Paclitaxel 10 mM
-1.4
N.D.
-0.2
+0.4
-0.4
stress
KB with Conessine 10 mM
-0.5
N.D.
-0.4
-0.4
-0.2
kb
KB
-0.9
N.D.
-0.1
+0.0
-0.5
stress
KB with Piperic 10 mM
-0.4
N.D.
+0.2
-0.1
-1.0
stress
KB with Harmol 10 mM
-0.5
N.D.
-0.4
-0.5
+0.1
stress
KB with Terpene 10 mM
-1.3
N.D.
-0.4
+0.2
+0.2
stress
KB with Avocatin A 10 mM
-0.7
N.D.
-0.2
+0.1
-0.3
stress
KB with Gossypetin 10 mM
-0.6
N.D.
-0.4
+0.1
-0.2
in planta
epiphytic; Lima bean
-0.2
N.D.
+0.3
-0.4
-0.8
stress
KB with Methyl-2-Hydroxy-Phenylproprionate 10 mM
-0.4
N.D.
+0.3
-0.6
-0.3
stress
KB with Levodopa 10 mM
-1.0
N.D.
-0.3
+0.7
-0.4
kb
KB
-0.7
N.D.
-0.1
+0.3
-0.3
stress
KB with Phloretin 125 ug/ml
+0.2
N.D.
+0.1
-0.3
-0.8
stress
KB with Piperine 10 mM
-1.1
N.D.
-0.1
+0.3
+0.3
stress
KB with Helenine 10 mM
-0.3
N.D.
-0.2
+0.5
-0.4
stress
KB with Totarol 10 mM
-0.3
N.D.
-0.2
+0.6
-0.4
stress
KB with Mitomycin C 0.05 ug/ml
-0.8
N.D.
-0.1
-0.1
+0.8
stress
KB with Palmatine 10 mM
+0.1
N.D.
-0.5
+0.5
-0.3
stress
KB with Nonanoic 10 mM
+0.1
N.D.
-0.2
+0.9
-0.2
stress
KB with capsaicin 0.25 mg/ml
+0.3
N.D.
-0.1
+0.7
-0.2
in planta
Green bean; epiphytic
+0.3
N.D.
-0.1
+0.8
-0.2
stress
KB with Acridine orange 3.125 ug/ml
-0.5
N.D.
-0.0
+0.9
+0.7
in planta
apoplastic, chopping recovery; Green bean
-0.5
N.D.
+0.2
+0.5
+0.8
in planta
apoplastic, chopping recovery; Green bean
-1.0
N.D.
+0.3
+1.3
+0.5
in planta
apoplastic, chopping recovery; Green bean
-1.0
N.D.
+0.2
+1.2
+0.7
in planta
apoplastic, chopping recovery; Green bean
-0.1
N.D.
+0.1
+0.7
+0.6
in planta
epiphytic; Lima bean
+0.6
N.D.
-0.1
+0.8
-0.1
stress
KB with Novobiocin 7.75 ug/ml
+0.1
N.D.
+0.3
+0.5
+0.7
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