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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1766 and Psyr_1767 are separated by 195 nucleotides
Psyr_1767 and Psyr_1768 are separated by 146 nucleotides
Psyr_1768 and Psyr_1769 are separated by 43 nucleotides
Psyr_1769 and Psyr_1770 are separated by 3 nucleotides
Psyr_1766: Psyr_1766 - conserved hypothetical protein, at 2,006,615 to 2,006,830
_1766
Psyr_1767: Psyr_1767 - NADPH-dependent FMN reductase, at 2,007,026 to 2,007,610
_1767
Psyr_1768: Psyr_1768 - conserved hypothetical protein, at 2,007,757 to 2,012,985
_1768
Psyr_1769: Psyr_1769 - Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal, at 2,013,029 to 2,014,180
_1769
Psyr_1770: Psyr_1770 - Enoyl-CoA hydratase/isomerase, at 2,014,184 to 2,015,281
_1770
Group
Condition
Psyr
_1766
Psyr
_1767
Psyr
_1768
Psyr
_1769
Psyr
_1770
stress
KB with Palmatine 10 mM
-1.3
-0.1
+0.0
-0.4
+0.0
stress
KB with 4-acetoxyphenol 10 mM
-1.0
-0.2
+0.0
-0.1
+0.0
stress
KB with Erythromycin 6.25 ug/ml
-0.8
-0.2
-0.1
-0.2
+0.2
stress
KB with Nalidixic 0.775 ug/ml
-0.7
+0.1
-0.1
-0.2
-0.1
stress
KB with Palmatine chloride 10 mM
-0.2
-0.0
-0.1
-1.0
+0.4
stress
KB with Lawsone 10 mM
-0.7
-0.1
+0.0
-0.3
+0.1
stress
KB with Totarol 10 mM
-0.6
+0.1
-0.0
-0.5
+0.1
stress
KB with L-alliin 10 mM
-0.9
-0.2
+0.1
-0.5
+0.6
stress
KB with Oxedrine 10 mM
-0.4
-0.4
-0.0
+0.3
-0.2
stress
KB with Avocadene 10 mM
-0.9
-0.1
-0.1
+0.2
+0.2
stress
KB with capsaicin 0.125 mg/ml
-1.0
+0.1
+0.1
+0.0
+0.2
stress
KB with Physcion 10 mM
-0.5
-0.0
+0.1
-0.4
+0.5
stress
KB with Avocadyne 10 mM
-0.3
+0.0
+0.0
-0.6
+0.5
stress
KB with Levodopa 10 mM
-0.8
-0.1
+0.1
+0.0
+0.5
stress
KB with Harmol 10 mM
-0.5
-0.0
+0.0
-0.3
+0.6
stress
KB with Emodin 10 mM
-0.5
+0.0
+0.0
-0.3
+0.5
stress
KB with Piperacillin 0.775 ug/ml
-0.8
+0.2
-0.0
+0.2
+0.1
stress
KB with Carbenicillin 3.1 ug/ml
-0.4
-0.1
-0.3
+0.1
+0.5
stress
KB with 4-hydroxychalcone 10 mM
-0.3
+0.1
-0.0
-0.3
+0.5
stress
KB with Methyl-2-Hydroxy-Phenylproprionate 10 mM
-0.5
-0.1
-0.1
+0.3
+0.4
in planta
Green bean; epiphytic
-0.6
+0.1
+0.0
+0.4
+0.5
in planta
apoplastic, chopping recovery; Green bean
+0.4
-0.2
-0.0
+0.6
-0.3
stress
KB with Harmine 10 mM
-0.4
-0.1
-0.1
+0.3
+0.7
stress
KB with Chloramphenicol 1.55 ug/ml
-0.4
+0.2
-0.0
+0.4
+0.3
stress
KB with Quercetin 360 ug/ml
-0.1
+0.2
-0.2
+0.4
+0.4
in planta
apoplastic, chopping recovery; Green bean
+0.4
+0.1
+0.0
+0.5
-0.3
in planta
epiphytic; Lima bean
+0.8
-0.3
+0.1
+0.1
+0.0
stress
KB with Sclareolide 10 mM
+0.7
-0.0
+0.0
-0.4
+0.6
in planta
apoplastic, chopping recovery; Green bean
+0.5
+0.1
+0.0
+0.6
-0.2
in planta
apoplastic; Green bean; 6 days
+0.7
+0.3
+0.2
-0.0
+0.4
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