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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1762 and Psyr_1763 are separated by 46 nucleotides
Psyr_1763 and Psyr_1764 are separated by 65 nucleotides
Psyr_1764 and Psyr_1765 are separated by 26 nucleotides
Psyr_1765 and Psyr_1766 are separated by 45 nucleotides
Psyr_1762: Psyr_1762 - conserved hypothetical protein, at 2,003,889 to 2,004,650
_1762
Psyr_1763: Psyr_1763 - RNase HI, at 2,004,697 to 2,005,149
_1763
Psyr_1764: Psyr_1764 - DNA polymerase III, epsilon subunit, at 2,005,215 to 2,005,994
_1764
Psyr_1765: Psyr_1765 - GCN5-related N-acetyltransferase, at 2,006,021 to 2,006,569
_1765
Psyr_1766: Psyr_1766 - conserved hypothetical protein, at 2,006,615 to 2,006,830
_1766
Group
Condition
Psyr
_1762
Psyr
_1763
Psyr
_1764
Psyr
_1765
Psyr
_1766
stress
KB with Acridine orange 3.125 ug/ml
-1.8
N.D.
N.D.
-1.8
+0.1
stress
KB with Berberine 15.6 ug/ml
-2.8
N.D.
N.D.
+0.2
+0.3
in planta
apoplastic, chopping recovery; Green bean
-0.3
N.D.
N.D.
-1.9
+0.0
stress
KB with Acriflavine 1.25 ug/ml
-1.9
N.D.
N.D.
-0.2
+0.2
stress
KB with Palmatine 10 mM
-1.0
N.D.
N.D.
+0.6
-1.3
in planta
apoplastic; Green bean; 6 days
-0.5
N.D.
N.D.
-1.1
-0.0
stress
KB with Levodopa 10 mM
-0.5
N.D.
N.D.
-0.2
-0.8
stress
KB with Harmine 10 mM
-1.6
N.D.
N.D.
+0.5
-0.4
stress
KB with Palmatine chloride 10 mM
-1.4
N.D.
N.D.
+0.5
-0.2
in planta
apoplastic, chopping recovery; Green bean
-0.4
N.D.
N.D.
-1.1
+0.4
stress
KB with Piperacillin 0.775 ug/ml
+0.1
N.D.
N.D.
-0.5
-0.8
in planta
apoplastic, chopping recovery; Green bean
-0.4
N.D.
N.D.
-1.2
+0.5
in planta
apoplastic, chopping recovery; Green bean
-0.5
N.D.
N.D.
-1.0
+0.4
stress
KB with Chrysophanol 10 mM
-0.6
N.D.
N.D.
+0.2
-0.7
stress
KB with Gossypetin 10 mM
-0.6
N.D.
N.D.
+0.2
-0.6
kb
KB
+0.2
N.D.
N.D.
-0.4
-0.8
stress
KB with Mitomycin C 0.05 ug/ml
+0.5
N.D.
N.D.
-1.3
-0.2
stress
KB with Benzalkonium chloride 1.55 ug/ml
-0.6
N.D.
N.D.
+0.3
-0.5
stress
KB with 4-acetoxyphenol 10 mM
-0.4
N.D.
N.D.
+0.7
-1.0
stress
KB with L-alliin 10 mM
-0.5
N.D.
N.D.
+0.7
-0.9
stress
KB with Emodin 10 mM
-0.5
N.D.
N.D.
+0.6
-0.5
stress
KB with Novobiocin 7.75 ug/ml
+0.7
N.D.
N.D.
-0.3
-0.7
in planta
apoplastic; Green bean; 6 days
-0.5
N.D.
N.D.
-0.5
+0.7
stress
KB with 4-hydroxychalcone 10 mM
-0.6
N.D.
N.D.
+0.6
-0.3
stress
KB with Lupeol 10 mM
-0.4
N.D.
N.D.
+0.8
-0.5
stress
KB with Avocadyne 10 mM
-0.5
N.D.
N.D.
+0.8
-0.3
stress
KB with Nonanoic 10 mM
-0.4
N.D.
N.D.
+0.7
-0.3
stress
KB with Totarol 10 mM
-0.2
N.D.
N.D.
+0.9
-0.6
kb
KB
-0.4
N.D.
N.D.
+0.9
-0.2
stress
KB with Sclareolide 10 mM
-0.4
N.D.
N.D.
+0.7
+0.7
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