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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
1
2
3
4
5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1754 and Psyr_1755 are separated by 18 nucleotides
Psyr_1755 and Psyr_1756 are separated by 1 nucleotides
Psyr_1756 and Psyr_1757 are separated by 1 nucleotides
Psyr_1757 and Psyr_1758 are separated by 2 nucleotides
Psyr_1754: Psyr_1754 - Enoyl-[acyl-carrier-protein] reductase [NADH], at 1,992,982 to 1,993,776
_1754
Psyr_1755: Psyr_1755 - ABC transporter, at 1,993,795 to 1,995,405
_1755
Psyr_1756: Psyr_1756 - Binding-protein-dependent transport systems inner membrane component, at 1,995,407 to 1,996,426
_1756
Psyr_1757: Psyr_1757 - Binding-protein-dependent transport systems inner membrane component, at 1,996,428 to 1,997,501
_1757
Psyr_1758: Psyr_1758 - extracellular solute-binding protein, family 5, at 1,997,504 to 1,999,360
_1758
Group
Condition
Psyr
_1754
Psyr
_1755
Psyr
_1756
Psyr
_1757
Psyr
_1758
stress
KB with Trimethoprim 15.6 ug/ml
N.D.
-1.8
-2.7
-2.2
-3.0
stress
KB with Mitomycin C 0.05 ug/ml
N.D.
-2.1
-2.2
-1.8
-2.4
stress
KB with Acriflavine 1.25 ug/ml
N.D.
-1.5
-2.3
-1.6
-2.4
stress
KB with Palmatine 10 mM
N.D.
-2.3
-2.0
-1.4
-2.0
stress
KB with Harmine 10 mM
N.D.
-1.6
-2.4
-1.4
-2.3
kb
KB
N.D.
-1.3
-2.0
-1.6
-2.1
stress
KB with Erythromycin 6.25 ug/ml
N.D.
-1.2
-1.7
-1.7
-2.0
stress
KB with Berberine 15.6 ug/ml
N.D.
-1.1
-1.7
-1.7
-2.0
stress
KB with Nalidixic 0.775 ug/ml
N.D.
-1.4
-1.2
-1.5
-2.0
stress
KB with Palmatine chloride 10 mM
N.D.
-2.1
-1.3
-1.1
-1.1
stress
KB with Dimethyl Sulfoxide 0.42 vol%
N.D.
-1.1
-1.5
-1.2
-1.6
stress
KB with Carbenicillin 3.1 ug/ml
N.D.
-0.2
-1.6
-1.2
-1.7
stress
KB with Acridine orange 3.125 ug/ml
N.D.
-1.1
-1.2
-0.7
-1.7
stress
KB with Phloretin 125 ug/ml
N.D.
-0.6
-1.4
-0.6
-1.7
stress
KB with Quercetin 360 ug/ml
N.D.
-1.0
-0.8
-1.0
-1.2
stress
KB with Flavone 0.125 mg/ml
N.D.
-1.3
-1.2
-0.4
-0.9
stress
KB with capsaicin 0.25 mg/ml
N.D.
-0.6
-1.4
-0.8
-0.7
stress
KB with capsaicin 0.125 mg/ml
N.D.
-0.7
-1.1
-0.8
-0.8
stress
KB with Chloramphenicol 1.55 ug/ml
N.D.
-0.7
-0.8
-0.8
-0.9
stress
KB with Piperine 10 mM
N.D.
-0.8
-1.2
-0.3
-0.9
stress
KB with Nitrofurantoin 0.0625 mg/ml
N.D.
-0.8
-0.9
-0.7
-0.5
stress
KB with Chrysophanol 10 mM
N.D.
-1.0
-1.0
-0.3
-0.4
stress
KB with Avocatin A 10 mM
N.D.
-0.8
-0.8
-0.5
-0.4
stress
KB with Tetracycline 0.0015 ug/ml
N.D.
-0.1
-0.9
-0.6
-0.7
stress
KB with Avocadyne 10 mM
N.D.
-0.8
-0.8
-0.4
-0.2
stress
KB with Biochanin a diacetate 10 mM
N.D.
-0.7
-0.8
-0.3
-0.4
stress
KB with Nonanoic 10 mM
N.D.
-0.8
-0.6
-0.2
-0.5
stress
KB with Chaulmoogric 10 mM
N.D.
-0.8
-0.7
-0.1
-0.4
stress
KB with Benzalkonium chloride 1.55 ug/ml
N.D.
-0.2
-0.8
-0.2
-0.8
in planta
epiphytic; Lima bean
N.D.
+0.5
+0.2
-1.0
-0.3
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