Fitness for 5 genes in Pseudomonas syringae pv. syringae B728a ΔmexB

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 94 experiments or choose conditions or try the comparative fitness browser

500 ntPsyr_1728 and Psyr_1729 are separated by 149 nucleotidesPsyr_1729 and Psyr_1730 are separated by 72 nucleotidesPsyr_1730 and Psyr_1731 are separated by 63 nucleotidesPsyr_1731 and Psyr_1732 are separated by 698 nucleotides Psyr_1728: Psyr_1728 - tRNA--hydroxylase, at 1,962,478 to 1,963,089 _1728 Psyr_1729: Psyr_1729 - transcriptional regulator, MarR family, at 1,963,239 to 1,963,727 _1729 Psyr_1730: Psyr_1730 - Secretion protein HlyD, at 1,963,800 to 1,965,008 _1730 Psyr_1731: Psyr_1731 - Drug resistance transporter EmrB/QacA subfamily, at 1,965,072 to 1,966,610 _1731 Psyr_1732: Psyr_1732 - UDP-2,3-diacylglucosamine hydrolase, at 1,967,309 to 1,968,055 _1732
Group Condition Psyr_1728 Psyr_1729 Psyr_1730 Psyr_1731 Psyr_1732
in planta apoplastic, chopping recovery; Green bean -0.4 -0.2 -0.3 +0.2 N.D.
stress KB with Mitomycin C 0.05 ug/ml -0.4 -0.6 +0.4 -0.2 N.D.
in planta Green bean; epiphytic +0.1 -0.4 -0.1 -0.3 N.D.
in planta epiphytic; Lima bean -0.5 +0.2 -0.1 -0.3 N.D.
stress KB with Berberine 15.6 ug/ml +0.1 -0.6 -0.0 +0.0 N.D.
stress KB with Palmatine chloride 10 mM -0.1 +0.3 -0.4 -0.1 N.D.
in planta apoplastic, chopping recovery; Green bean -0.1 +0.0 -0.4 +0.2 N.D.
in planta apoplastic, chopping recovery; Green bean -0.0 -0.2 -0.3 +0.3 N.D.
stress KB with Dimethyl Sulfoxide 1.25 vol% +0.4 -0.3 -0.0 -0.2 N.D.
in planta apoplastic, chopping recovery; Green bean -0.6 +0.3 -0.3 +0.3 N.D.
stress KB with 4-hydroxychalcone 10 mM +0.4 -0.1 -0.1 -0.4 N.D.
stress KB with capsaicin 0.125 mg/ml +0.5 -0.4 +0.0 -0.2 N.D.
stress KB with Dimethyl Sulfoxide 0.42 vol% +0.4 -0.6 +0.1 +0.1 N.D.
stress KB with Escin 10 mM -0.1 +0.2 +0.2 -0.3 N.D.
stress KB with Veratrine 10 mM +0.4 +0.1 -0.2 -0.2 N.D.
kb KB +0.5 -0.1 +0.0 -0.3 N.D.
stress KB with Benzalkonium chloride 1.55 ug/ml +0.3 +0.2 -0.0 -0.3 N.D.
stress KB with D-Salicin 240 ug/ml -0.3 +0.5 +0.1 -0.0 N.D.
stress KB with Acridine orange 3.125 ug/ml -0.3 -0.1 +0.4 +0.4 N.D.
stress KB with Quercetin 360 ug/ml +0.2 +0.3 +0.1 -0.2 N.D.
stress KB with d-limonene 10 mM +0.4 -0.4 +0.2 +0.2 N.D.
stress KB with Chloramphenicol 1.55 ug/ml +0.2 -0.2 +0.1 +0.4 N.D.
stress KB with Totarol 10 mM +0.4 +0.3 -0.2 -0.1 N.D.
stress KB with Nonanoic 10 mM +0.5 +0.1 -0.2 +0.3 N.D.
stress KB with Piperine 10 mM +0.4 +0.4 -0.1 -0.1 N.D.
stress KB with Palmatine 10 mM +0.5 +0.2 -0.0 -0.1 N.D.
stress KB with Physcion 10 mM +0.6 -0.1 +0.1 +0.1 N.D.
stress KB with Prenyletin 10 mM +0.4 +0.4 -0.1 +0.0 N.D.
stress KB with Levodopa 10 mM +0.5 +0.1 -0.1 +0.2 N.D.
stress KB with Tetracycline 0.0015 ug/ml +0.3 +0.4 +0.0 +0.2 N.D.
remove
Psyr_1728
plot		 remove
Psyr_1729
plot		 remove
Psyr_1730		 remove
Psyr_1731
plot		 remove
Psyr_1732
plot