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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1590 and Psyr_1591 are separated by 55 nucleotides
Psyr_1591 and Psyr_1592 are separated by 32 nucleotides
Psyr_1592 and Psyr_1593 are separated by 247 nucleotides
Psyr_1593 and Psyr_1594 are separated by 206 nucleotides
Psyr_1590: Psyr_1590 - L-carnitine dehydratase/bile acid-inducible protein F, at 1,789,271 to 1,790,461
_1590
Psyr_1591: Psyr_1591 - Glyoxalase/bleomycin resistance protein/dioxygenase, at 1,790,517 to 1,790,909
_1591
Psyr_1592: Psyr_1592 - conserved hypothetical protein, at 1,790,942 to 1,791,460
_1592
Psyr_1593: Psyr_1593 - conserved hypothetical protein, at 1,791,708 to 1,793,117
_1593
Psyr_1594: Psyr_1594 - FKBP-type peptidyl-prolyl isomerase, N-terminal:Peptidylprolyl isomerase, FKBP-type, at 1,793,324 to 1,794,094
_1594
Group
Condition
Psyr
_1590
Psyr
_1591
Psyr
_1592
Psyr
_1593
Psyr
_1594
stress
KB with Piperic 10 mM
-0.3
+0.2
-0.1
+0.0
-1.3
stress
KB with Chrysophanol 10 mM
+0.0
+0.2
-0.0
+0.1
-1.4
stress
KB with Paclitaxel 10 mM
+0.1
+0.0
+0.0
-0.1
-1.0
stress
KB with Piperine 10 mM
+0.1
-0.2
+0.2
-0.1
-1.0
kb
KB
-0.1
-0.1
+0.1
+0.0
-0.9
stress
KB with Helenine 10 mM
-0.0
+0.1
-0.0
+0.1
-1.0
stress
KB with Isosafrole 10 mM
-0.1
+0.2
+0.1
-0.1
-0.9
stress
KB with Gossypetin 10 mM
-0.0
+0.3
-0.3
+0.0
-0.7
stress
KB with Auraptene 10 mM
+0.2
+0.1
-0.2
+0.0
-0.9
stress
KB with Anethole 10 mM
+0.1
+0.1
-0.2
+0.1
-0.8
stress
KB with Terpene 10 mM
-0.1
+0.3
-0.1
+0.1
-0.8
kb
KB
+0.1
-0.2
+0.2
+0.0
-0.7
stress
KB with Nonanoic 10 mM
-0.2
+0.3
-0.2
-0.0
-0.5
stress
KB with Strychnine Sulfate 10 mM
+0.0
+0.2
+0.1
+0.0
-0.9
stress
KB with d-limonene 10 mM
+0.1
+0.2
+0.0
-0.1
-0.8
stress
KB with Palmatine 10 mM
+0.2
+0.2
+0.2
+0.1
-1.2
stress
KB with 4-acetoxyphenol 10 mM
-0.2
+0.5
-0.1
-0.0
-0.6
stress
KB with Avocadyne 10 mM
-0.2
+0.3
+0.1
+0.2
-0.9
stress
KB with Harmol Hydrochloride 10 mM
+0.1
+0.2
+0.2
-0.1
-0.8
stress
KB with Gamma-Aminobutyric Acid Hydrochloride 10 mM
-0.0
+0.3
+0.2
-0.0
-0.9
stress
KB with Harmol 10 mM
-0.1
+0.3
+0.0
+0.1
-0.9
in planta
epiphytic; Lima bean
+0.2
+0.3
-0.0
-0.0
-1.0
stress
KB with Acridine orange 3.125 ug/ml
-0.5
-0.0
+0.3
+0.1
-0.3
stress
KB with Cantharidin 10 mM
+0.0
+0.3
+0.2
-0.1
-0.7
stress
KB with Anabasine Hydrochloride 10 mM
-0.2
+0.3
+0.3
+0.1
-0.7
stress
KB with Veratrine 10 mM
+0.0
+0.5
+0.3
-0.0
-0.8
in planta
epiphytic; Lima bean
-0.2
+0.7
-0.3
-0.0
+0.1
stress
KB with Nitrofurantoin 31.25 ug/ml
+0.3
+0.3
+0.1
+0.2
-0.3
stress
KB with Carbenicillin 3.1 ug/ml
+0.3
+0.8
+0.1
+0.0
-0.3
in planta
apoplastic, chopping recovery; Green bean
+0.2
+0.6
+0.1
+0.1
+0.5
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