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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1549 and Psyr_1550 are separated by 0 nucleotides
Psyr_1550 and Psyr_1551 are separated by 28 nucleotides
Psyr_1551 and Psyr_RNA25 are separated by 92 nucleotides
Psyr_RNA25 and Psyr_1552 are separated by 58 nucleotides
Psyr_1549: Psyr_1549 - lipoprotein, putative, at 1,742,241 to 1,743,359
_1549
Psyr_1550: Psyr_1550 - Beta-lactamase-like protein, at 1,743,360 to 1,744,118
_1550
Psyr_1551: Psyr_1551 - phosphoribosylaminoimidazole-succinocarboxamide synthase, at 1,744,147 to 1,744,857
_1551
Psyr_RNA25: Psyr_RNA25 - tRNA-Ser, at 1,744,950 to 1,745,039
_RNA25
Psyr_1552: Psyr_1552 - CDS, at 1,745,098 to 1,745,496
_1552
Group
Condition
Psyr
_1549
Psyr
_1550
Psyr
_1551
Psyr
_RNA25
Psyr
_1552
stress
KB with Acriflavine 1.25 ug/ml
-1.3
-0.2
N.D.
N.D.
-0.2
stress
KB with Berberine 15.6 ug/ml
-1.3
-0.1
N.D.
N.D.
-0.0
stress
KB with Palmatine chloride 10 mM
-0.6
-0.3
N.D.
N.D.
-0.2
stress
KB with Emodin 10 mM
-0.5
-0.4
N.D.
N.D.
-0.2
in planta
epiphytic; Lima bean
-0.3
-0.9
N.D.
N.D.
+0.3
in planta
Green bean; epiphytic
-0.7
-0.2
N.D.
N.D.
+0.1
in planta
apoplastic, chopping recovery; Green bean
-0.9
-0.1
N.D.
N.D.
+0.1
stress
KB with Acridine orange 3.125 ug/ml
-0.6
-0.4
N.D.
N.D.
+0.1
stress
KB with Nalidixic 0.775 ug/ml
-0.4
-0.3
N.D.
N.D.
-0.2
stress
KB with Harmine 10 mM
-1.1
+0.1
N.D.
N.D.
+0.3
stress
KB with Dimethyl Sulfoxide 1.25 vol%
-0.4
-0.3
N.D.
N.D.
-0.1
stress
KB with Flavone 0.125 mg/ml
-0.7
-0.1
N.D.
N.D.
+0.1
stress
KB with Curcumin 10 mM
-0.4
-0.4
N.D.
N.D.
+0.1
stress
KB with Piperic 10 mM
-0.4
-0.4
N.D.
N.D.
+0.1
stress
KB with capsaicin 0.125 mg/ml
-0.9
+0.2
N.D.
N.D.
+0.0
stress
KB with Erythromycin 6.25 ug/ml
-0.9
+0.2
N.D.
N.D.
+0.1
stress
KB with Palmatine 10 mM
-0.4
-0.5
N.D.
N.D.
+0.2
in planta
apoplastic, chopping recovery; Green bean
-0.9
+0.2
N.D.
N.D.
+0.1
stress
KB with Quercetin 360 ug/ml
-1.0
+0.2
N.D.
N.D.
+0.3
stress
KB with capsaicin 0.25 mg/ml
-0.7
+0.2
N.D.
N.D.
+0.0
in planta
apoplastic, chopping recovery; Green bean
-0.5
+0.0
N.D.
N.D.
+0.2
stress
KB with Terpene 10 mM
+0.3
-0.7
N.D.
N.D.
+0.1
stress
KB with Rifampicin 0.1 mg/ml
-0.6
+0.4
N.D.
N.D.
-0.0
stress
KB with Mitomycin C 0.05 ug/ml
-0.4
-0.1
N.D.
N.D.
+0.4
stress
KB with Sinomenine 10 mM
+0.4
-0.3
N.D.
N.D.
+0.3
stress
KB with Escin 10 mM
+0.3
-0.3
N.D.
N.D.
+0.5
stress
KB with Oxedrine 10 mM
+0.4
-0.2
N.D.
N.D.
+0.3
stress
KB with Avocadene 10 mM
+0.4
+0.0
N.D.
N.D.
+0.5
stress
KB with Isosafrole 10 mM
+0.6
+0.2
N.D.
N.D.
+0.2
stress
KB with Carbenicillin 3.1 ug/ml
-0.3
+1.1
N.D.
N.D.
+0.2
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