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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1536 and Psyr_1537 are separated by 36 nucleotides
Psyr_1537 and Psyr_1538 are separated by 78 nucleotides
Psyr_1538 and Psyr_1539 are separated by 2069 nucleotides
Psyr_1539 and Psyr_1540 are separated by 385 nucleotides
Psyr_1536: Psyr_1536 - Amine oxidase, at 1,725,786 to 1,727,459
_1536
Psyr_1537: Psyr_1537 - Amidase, at 1,727,496 to 1,728,836
_1537
Psyr_1538: Psyr_1538 - Propionyl-CoA carboxylase, at 1,728,915 to 1,730,282
_1538
Psyr_1539: Psyr_1539 - Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer, at 1,732,352 to 1,734,232
_1539
Psyr_1540: Psyr_1540 - hypothetical protein, at 1,734,618 to 1,734,884
_1540
Group
Condition
Psyr
_1536
Psyr
_1537
Psyr
_1538
Psyr
_1539
Psyr
_1540
stress
KB with Veratrine 10 mM
-0.0
-0.0
-0.3
-0.2
-2.0
stress
KB with Piperine 10 mM
-0.2
+0.2
-0.2
-0.3
-1.1
stress
KB with Palmatine chloride 10 mM
+0.0
-0.0
-0.1
-0.3
-1.3
stress
KB with Paclitaxel 10 mM
-0.0
+0.0
-0.3
-0.3
-1.1
stress
KB with d-limonene 10 mM
-0.1
-0.1
-0.2
-0.0
-1.3
stress
KB with Hydrastine (1R, 9S) 10 mM
-0.0
-0.0
-0.3
-0.2
-1.1
stress
KB with Acriflavine 1.25 ug/ml
-0.0
+0.1
-0.1
-0.1
-1.2
stress
KB with Palmatine 10 mM
+0.0
+0.0
-0.1
-0.2
-1.1
stress
KB with Tetracycline 0.0015 ug/ml
+0.1
-0.1
-0.2
-0.2
-1.0
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.0
+0.0
-0.0
-0.2
-1.2
stress
KB with Diallyl sulfide 10 mM
-0.1
+0.1
-0.2
-0.1
-1.1
stress
KB with Harmol 10 mM
-0.0
+0.0
-0.3
-0.2
-0.8
stress
KB with Anethole 10 mM
-0.1
-0.0
-0.2
-0.1
-0.9
stress
KB with Escin 10 mM
-0.1
+0.1
-0.5
-0.1
-0.8
stress
KB with Cantharidin 10 mM
-0.0
-0.0
-0.3
-0.1
-0.8
stress
KB with Gamma-Aminobutyric Acid Hydrochloride 10 mM
+0.2
+0.0
-0.1
-0.1
-1.2
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.1
+0.1
-0.1
-0.0
-1.2
kb
KB
+0.1
+0.1
-0.1
-0.0
-1.2
stress
KB with Conessine 10 mM
+0.0
+0.1
-0.1
-0.1
-1.1
stress
KB with L-alliin 10 mM
+0.0
+0.1
-0.1
-0.1
-1.0
stress
KB with Gossypetin 10 mM
+0.0
+0.1
-0.1
+0.0
-1.2
stress
KB with Totarol 10 mM
+0.0
-0.1
+0.1
-0.0
-1.1
stress
KB with Emodin 10 mM
+0.1
+0.1
+0.0
-0.1
-1.2
stress
KB with Piperic 10 mM
-0.2
+0.2
-0.1
-0.2
-0.4
stress
KB with Harmine 10 mM
-0.2
+0.4
-0.3
-0.2
-0.5
stress
KB with Gossypol-Acetic Acid Complex 10 mM
+0.2
+0.1
-0.2
-0.2
-0.5
in planta
apoplastic; Green bean; 6 days
-0.1
-0.2
+0.2
+0.2
-0.7
in planta
apoplastic; Green bean; 6 days
-0.1
+0.1
+0.1
+0.2
-0.7
stress
KB with Mitomycin C 0.05 ug/ml
-0.3
-0.1
-0.4
+0.0
+0.6
in planta
epiphytic; Lima bean
+0.2
+0.1
+0.5
+0.1
-0.6
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