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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1491 and Psyr_1492 are separated by 275 nucleotides
Psyr_1492 and Psyr_1493 are separated by 466 nucleotides
Psyr_1493 and Psyr_1494 are separated by 5 nucleotides
Psyr_1494 and Psyr_1495 are separated by 64 nucleotides
Psyr_1491: Psyr_1491 - Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer, at 1,678,195 to 1,679,814
_1491
Psyr_1492: Psyr_1492 - Phage integrase:Phage integrase, N-terminal SAM-like protein, at 1,680,090 to 1,681,052
_1492
Psyr_1493: Psyr_1493 - Twin-arginine translocation pathway signal:Copper-resistance protein CopA, at 1,681,519 to 1,683,339
_1493
Psyr_1494: Psyr_1494 - Copper resistance B precursor, at 1,683,345 to 1,684,283
_1494
Psyr_1495: Psyr_1495 - Copper resistance protein CopC, at 1,684,348 to 1,684,728
_1495
Group
Condition
Psyr
_1491
Psyr
_1492
Psyr
_1493
Psyr
_1494
Psyr
_1495
in planta
Green bean; epiphytic
-0.0
+0.0
-0.2
-0.3
-0.3
stress
KB with Mitomycin C 0.05 ug/ml
-0.5
-0.2
-0.1
-0.1
+0.1
stress
KB with Conessine 10 mM
-0.0
-0.2
-0.1
-0.1
-0.1
stress
KB with Rotenone 0.25 mg/ml
-0.1
-0.2
-0.1
-0.3
+0.1
stress
KB with Rifampicin 0.1 mg/ml
-0.2
+0.1
+0.0
-0.2
-0.2
stress
KB with Sclareolide 10 mM
+0.2
-0.0
-0.0
-0.2
-0.3
stress
KB with Usnic Acid 10 mM
-0.1
-0.2
-0.2
+0.1
+0.1
stress
KB with capsaicin 0.25 mg/ml
-0.1
+0.1
-0.1
-0.1
-0.1
stress
KB with Nonanoic 10 mM
+0.1
+0.0
+0.0
-0.0
-0.4
stress
KB with Auraptene 10 mM
+0.1
-0.3
-0.0
+0.0
-0.1
stress
KB with 4-acetoxyphenol 10 mM
+0.2
+0.0
-0.2
-0.2
-0.1
in planta
apoplastic; Green bean; 6 days
+0.1
-0.0
+0.1
-0.1
-0.4
kb
KB
+0.1
-0.1
+0.0
-0.1
-0.2
stress
KB with Avocadyne 10 mM
+0.0
+0.0
+0.1
+0.1
-0.4
stress
KB with Veratrine 10 mM
-0.2
+0.1
+0.1
+0.1
-0.2
stress
KB with Flavone 0.125 mg/ml
-0.1
+0.2
-0.1
-0.3
+0.0
stress
KB with Harmol 10 mM
+0.1
-0.3
+0.2
-0.1
-0.1
stress
KB with Palmatine 10 mM
+0.1
-0.2
+0.1
-0.1
-0.1
stress
KB with Diallyl sulfide 10 mM
+0.1
-0.2
+0.1
-0.1
-0.0
in planta
apoplastic; Green bean; 6 days
+0.2
-0.0
+0.1
+0.1
-0.4
stress
KB with Lawsone 10 mM
+0.1
-0.3
+0.1
+0.1
-0.0
in planta
epiphytic; Lima bean
-0.1
+0.1
-0.2
+0.0
+0.2
stress
KB with Chaulmoogric 10 mM
+0.2
+0.0
+0.1
+0.1
-0.3
stress
KB with Paclitaxel 10 mM
+0.1
-0.2
+0.2
-0.1
+0.2
stress
KB with Prenyletin 10 mM
+0.1
+0.3
+0.0
-0.1
-0.0
in planta
apoplastic, chopping recovery; Green bean
-0.1
+0.1
+0.1
+0.0
+0.2
stress
KB with Acriflavine 1.25 ug/ml
+0.1
-0.1
-0.1
+0.1
+0.3
stress
KB with Harmine 10 mM
-0.2
+0.1
+0.0
-0.0
+0.4
stress
KB with Quercetin 360 ug/ml
+0.1
+0.0
+0.1
+0.2
+0.1
stress
KB with Carbenicillin 3.1 ug/ml
-0.0
+0.0
-0.2
+0.2
+0.5
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