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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1388 and Psyr_1389 are separated by 10 nucleotides
Psyr_1389 and Psyr_1390 are separated by 79 nucleotides
Psyr_1390 and Psyr_1391 are separated by 92 nucleotides
Psyr_1391 and Psyr_1392 are separated by 102 nucleotides
Psyr_1388: Psyr_1388 - Protein of unknown function UPF0066, at 1,570,005 to 1,570,697
_1388
Psyr_1389: Psyr_1389 - Protein of unknown function DUF1456, at 1,570,708 to 1,571,169
_1389
Psyr_1390: Psyr_1390 - RNA-binding S4, at 1,571,249 to 1,571,959
_1390
Psyr_1391: Psyr_1391 - GCN5-related N-acetyltransferase, at 1,572,052 to 1,572,492
_1391
Psyr_1392: Psyr_1392 - SSU ribosomal protein S12P methylthiotransferase, at 1,572,595 to 1,573,938
_1392
Group
Condition
Psyr
_1388
Psyr
_1389
Psyr
_1390
Psyr
_1391
Psyr
_1392
stress
KB with Diallyl sulfide 10 mM
-2.6
-0.3
-0.1
+0.1
-0.0
in planta
epiphytic; Lima bean
-0.4
-2.3
+0.7
-0.1
-0.4
in planta
apoplastic; Green bean; 6 days
-1.3
-0.3
-0.3
-0.5
-0.1
stress
KB with Sclareolide 10 mM
-1.6
-0.1
+0.1
-0.1
+0.0
in planta
apoplastic; Green bean; 6 days
-0.9
-0.4
-0.1
-0.4
+0.0
stress
KB with Sinomenine 10 mM
-0.6
-1.0
+0.2
-0.1
-0.0
stress
KB with Conessine 10 mM
-0.8
-0.3
-0.2
-0.3
+0.0
in planta
apoplastic, chopping recovery; Green bean
-2.3
+0.3
-0.2
+0.6
+0.3
stress
KB with Carbenicillin 3.1 ug/ml
+0.1
-2.2
-0.2
+0.4
+0.5
stress
KB with Piperine 10 mM
-0.6
-0.9
-0.2
+0.0
+0.4
stress
KB with Erythromycin 6.25 ug/ml
-1.1
+0.1
-0.2
-0.1
+0.1
in planta
apoplastic, chopping recovery; Green bean
-1.1
-0.5
-0.3
+0.4
+0.4
stress
KB with Veratrine 10 mM
+0.4
-1.1
-0.3
-0.1
+0.1
in planta
apoplastic, chopping recovery; Green bean
-1.8
-0.1
-0.0
+0.7
+0.3
stress
KB with Harmine 10 mM
+0.1
-1.3
+0.2
+0.3
-0.1
stress
KB with Palmatine chloride 10 mM
+1.0
-1.5
-0.2
-0.1
-0.1
stress
KB with Avocatin A 10 mM
-0.9
+0.2
-0.0
-0.2
+0.4
stress
KB with Flavone 0.125 mg/ml
-1.2
+0.1
+0.3
+0.1
+0.1
stress
KB with Mitomycin C 0.05 ug/ml
-0.8
-0.5
+0.4
-0.1
+0.6
stress
KB with Phloretin 125 ug/ml
+0.6
-0.7
-0.0
+0.2
-0.2
stress
KB with Methyl-2-Hydroxy-Phenylproprionate 10 mM
+0.6
-0.7
+0.2
-0.1
-0.0
stress
KB with Benzalkonium chloride 1.55 ug/ml
+0.6
-0.8
+0.2
+0.4
-0.2
stress
KB with Strychnine Sulfate 10 mM
+1.2
-1.1
+0.1
-0.1
+0.1
stress
KB with Isosafrole 10 mM
+1.2
-0.8
+0.2
-0.1
-0.0
stress
KB with Anabasine Hydrochloride 10 mM
+1.5
-0.9
+0.3
-0.3
-0.1
stress
KB with Usnic Acid 10 mM
+0.9
-0.6
+0.1
-0.1
+0.1
stress
KB with Novobiocin 7.75 ug/ml
+0.7
-0.7
+0.2
+0.3
+0.3
in planta
Green bean; epiphytic
+1.1
-0.6
+0.3
+0.0
+0.3
kb
KB
+0.7
+0.4
-0.2
-0.1
+0.2
stress
KB with Harmol Hydrochloride 10 mM
+0.9
-0.2
+0.2
-0.1
+0.3
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