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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1370 and Psyr_1371 overlap by 13 nucleotides
Psyr_1371 and Psyr_1372 overlap by 1 nucleotides
Psyr_1372 and Psyr_1373 are separated by 208 nucleotides
Psyr_1373 and Psyr_1374 are separated by 103 nucleotides
Psyr_1370: Psyr_1370 - tRNA pseudouridine synthase D, TruD, at 1,553,050 to 1,554,108
_1370
Psyr_1371: Psyr_1371 - 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase, at 1,554,096 to 1,554,845
_1371
Psyr_1372: Psyr_1372 - Protein-L-isoaspartate(D-aspartate) O-methyltransferase, at 1,554,845 to 1,555,522
_1372
Psyr_1373: Psyr_1373 - Peptidoglycan-binding LysM:Peptidase M23B, at 1,555,731 to 1,556,597
_1373
Psyr_1374: Psyr_1374 - RNA polymerase, sigma 38 subunit, RpoS, at 1,556,701 to 1,557,708
_1374
Group
Condition
Psyr
_1370
Psyr
_1371
Psyr
_1372
Psyr
_1373
Psyr
_1374
stress
KB with Trimethoprim 15.6 ug/ml
-0.0
-3.9
-0.6
N.D.
+0.1
stress
KB with Nitrofurantoin 0.0625 mg/ml
-0.3
-2.9
-0.8
N.D.
+0.0
stress
KB with Gossypetin 10 mM
-0.1
-1.4
-1.1
N.D.
-0.5
stress
KB with Palmatine chloride 10 mM
+0.3
-0.8
-2.0
N.D.
-0.5
stress
KB with Mitomycin C 0.05 ug/ml
-0.3
-0.8
-1.6
N.D.
-0.3
stress
KB with capsaicin 0.25 mg/ml
-0.1
-1.6
-1.3
N.D.
+0.1
stress
KB with Conessine 10 mM
+0.2
-1.4
-1.0
N.D.
-0.7
stress
KB with 4-hydroxychalcone 10 mM
-0.3
-1.4
-0.8
N.D.
-0.4
stress
KB with Auraptene 10 mM
-0.5
-1.0
-0.9
N.D.
-0.5
stress
KB with Solanesol 10 mM
-0.2
-1.4
-0.4
N.D.
-0.7
stress
KB with Nonanoic 10 mM
-0.2
-1.5
-0.5
N.D.
-0.5
stress
KB with Chrysophanol 10 mM
+0.2
-1.6
-0.9
N.D.
-0.4
stress
KB with Hydrastine (1R, 9S) 10 mM
+0.2
-1.3
-1.2
N.D.
-0.3
stress
KB with Terpene 10 mM
-0.2
-1.3
-0.8
N.D.
-0.3
stress
KB with Nalidixic 0.775 ug/ml
-0.8
-1.4
-0.6
N.D.
+0.2
stress
KB with 4-acetoxyphenol 10 mM
-0.3
-1.3
-0.6
N.D.
-0.3
stress
KB with Diallyl sulfide 10 mM
-0.2
-1.3
-0.7
N.D.
-0.3
kb
KB
+0.1
-1.3
-0.7
N.D.
-0.5
stress
KB with Helenine 10 mM
+0.1
-1.0
-1.1
N.D.
-0.4
stress
KB with L-alliin 10 mM
-0.2
-1.0
-0.6
N.D.
-0.6
in planta
epiphytic; Lima bean
-0.3
-1.0
-1.3
N.D.
+0.2
stress
KB with Avocadyne 10 mM
-0.1
-1.5
-0.5
N.D.
-0.3
stress
KB with Sclareolide 10 mM
-0.3
-1.3
-0.3
N.D.
-0.5
stress
KB with Levodopa 10 mM
+0.4
-1.2
-0.8
N.D.
-0.6
stress
KB with Quercetin 360 ug/ml
+0.1
-1.2
-0.9
N.D.
-0.0
stress
KB with Totarol 10 mM
+0.2
-1.3
+0.1
N.D.
-0.9
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.2
-1.5
-0.5
N.D.
+0.0
stress
KB with Emodin 10 mM
+0.2
-1.3
-0.6
N.D.
-0.1
stress
KB with Dimethyl Sulfoxide 0.42 vol%
-0.2
-1.7
-0.1
N.D.
+0.2
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.5
-1.2
-0.4
N.D.
-0.5
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