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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1348 and Psyr_1349 overlap by 4 nucleotides
Psyr_1349 and Psyr_1350 are separated by 117 nucleotides
Psyr_1350 and Psyr_1351 are separated by 74 nucleotides
Psyr_1351 and Psyr_1352 are separated by 69 nucleotides
Psyr_1348: Psyr_1348 - Phosphatidate cytidylyltransferase, at 1,527,289 to 1,528,104
_1348
Psyr_1349: Psyr_1349 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase, at 1,528,101 to 1,529,291
_1349
Psyr_1350: Psyr_1350 - site-2 protease, Metallo peptidase, MEROPS family M50B, at 1,529,409 to 1,530,761
_1350
Psyr_1351: Psyr_1351 - surface antigen (D15):Surface antigen variable number, at 1,530,836 to 1,533,211
_1351
Psyr_1352: Psyr_1352 - Outer membrane protein (OmpH-like), at 1,533,281 to 1,533,760
_1352
Group
Condition
Psyr
_1348
Psyr
_1349
Psyr
_1350
Psyr
_1351
Psyr
_1352
in planta
apoplastic, chopping recovery; Green bean
N.D.
N.D.
-4.7
N.D.
N.D.
in planta
apoplastic, chopping recovery; Green bean
N.D.
N.D.
-4.2
N.D.
N.D.
in planta
apoplastic; Green bean; 6 days
N.D.
N.D.
-3.8
N.D.
N.D.
in planta
apoplastic; Green bean; 6 days
N.D.
N.D.
-3.6
N.D.
N.D.
in planta
apoplastic, chopping recovery; Green bean
N.D.
N.D.
-3.2
N.D.
N.D.
in planta
apoplastic, chopping recovery; Green bean
N.D.
N.D.
-3.2
N.D.
N.D.
stress
KB with Erythromycin 6.25 ug/ml
N.D.
N.D.
-1.5
N.D.
N.D.
stress
KB with Lawsone 10 mM
N.D.
N.D.
-1.1
N.D.
N.D.
stress
KB with Dimethyl Sulfoxide 1.25 vol%
N.D.
N.D.
-1.1
N.D.
N.D.
stress
KB with Piperine 10 mM
N.D.
N.D.
-1.1
N.D.
N.D.
stress
KB with Curcumin 10 mM
N.D.
N.D.
-1.0
N.D.
N.D.
stress
KB with Carbenicillin 3.1 ug/ml
N.D.
N.D.
-1.0
N.D.
N.D.
stress
KB with Escin 10 mM
N.D.
N.D.
-1.0
N.D.
N.D.
stress
KB with Biochanin a diacetate 10 mM
N.D.
N.D.
-1.0
N.D.
N.D.
stress
KB with Terpene 10 mM
N.D.
N.D.
-1.0
N.D.
N.D.
stress
KB with Phloretin 125 ug/ml
N.D.
N.D.
-0.9
N.D.
N.D.
stress
KB with Anethole 10 mM
N.D.
N.D.
-0.9
N.D.
N.D.
stress
KB with Avocatin A 10 mM
N.D.
N.D.
-0.8
N.D.
N.D.
stress
KB with Nitrofurantoin 0.0625 mg/ml
N.D.
N.D.
-0.8
N.D.
N.D.
stress
KB with Helenine 10 mM
N.D.
N.D.
-0.8
N.D.
N.D.
stress
KB with Physcion 10 mM
N.D.
N.D.
-0.8
N.D.
N.D.
stress
KB with Emodin 10 mM
N.D.
N.D.
-0.8
N.D.
N.D.
kb
KB
N.D.
N.D.
-0.8
N.D.
N.D.
stress
KB with Sclareolide 10 mM
N.D.
N.D.
-0.7
N.D.
N.D.
stress
KB with Chrysophanol 10 mM
N.D.
N.D.
-0.7
N.D.
N.D.
stress
KB with Lupeol 10 mM
N.D.
N.D.
-0.7
N.D.
N.D.
stress
KB with Acridine orange 3.125 ug/ml
N.D.
N.D.
-0.7
N.D.
N.D.
stress
KB with Paclitaxel 10 mM
N.D.
N.D.
-0.7
N.D.
N.D.
in planta
epiphytic; Lima bean
N.D.
N.D.
+0.6
N.D.
N.D.
stress
KB with Benzalkonium chloride 1.55 ug/ml
N.D.
N.D.
+0.8
N.D.
N.D.
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