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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1330 and Psyr_1331 overlap by 1 nucleotides
Psyr_1331 and Psyr_1332 are separated by 99 nucleotides
Psyr_1332 and Psyr_1333 are separated by 301 nucleotides
Psyr_1333 and Psyr_1334 overlap by 10 nucleotides
Psyr_1330: Psyr_1330 - 23S rRNA m(1)G-745 methyltransferase, at 1,507,802 to 1,508,611
_1330
Psyr_1331: Psyr_1331 - succinyldiaminopimelate desuccinylase, at 1,508,611 to 1,509,762
_1331
Psyr_1332: Psyr_1332 - Glycosyl transferase, family 2, at 1,509,862 to 1,512,357
_1332
Psyr_1333: Psyr_1333 - UBA/THIF-type NAD/FAD binding fold protein, at 1,512,659 to 1,513,489
_1333
Psyr_1334: Psyr_1334 - Cysteine desulfuration protein SufE, at 1,513,480 to 1,513,887
_1334
Group
Condition
Psyr
_1330
Psyr
_1331
Psyr
_1332
Psyr
_1333
Psyr
_1334
stress
KB with Biochanin a diacetate 10 mM
+0.2
N.D.
-0.1
-0.0
-1.5
in planta
epiphytic; Lima bean
-0.5
N.D.
+0.0
+0.3
-1.0
stress
KB with Acridine orange 3.125 ug/ml
-0.5
N.D.
-0.1
+0.2
-0.3
in planta
apoplastic, chopping recovery; Green bean
-0.5
N.D.
+0.0
+0.1
-0.4
stress
KB with Escin 10 mM
+0.2
N.D.
-0.1
-0.2
-0.4
stress
KB with Oxonitine 10 mM
+0.0
N.D.
-0.2
+0.3
-0.6
stress
KB with Mitomycin C 0.05 ug/ml
-0.5
N.D.
-0.4
+0.3
+0.2
stress
KB with Cantharidin 10 mM
+0.2
N.D.
-0.0
+0.1
-0.6
stress
KB with 4-acetoxyphenol 10 mM
+0.1
N.D.
+0.3
+0.4
-0.9
stress
KB with Lupeol 10 mM
-0.5
N.D.
+0.1
+0.5
-0.3
stress
KB with Strychnine Sulfate 10 mM
-0.3
N.D.
+0.0
+0.5
-0.3
stress
KB with Cotarnine Chloride 10 mM
+0.4
N.D.
+0.0
+0.1
-0.6
in planta
apoplastic, chopping recovery; Green bean
+0.0
N.D.
+0.1
+0.5
-0.6
in planta
apoplastic, chopping recovery; Green bean
-0.5
N.D.
+0.1
+0.4
+0.1
stress
KB with Isosafrole 10 mM
+0.3
N.D.
+0.1
+0.4
-0.6
kb
KB
+0.5
N.D.
-0.1
+0.1
-0.4
stress
KB with Curcumin 10 mM
-0.3
N.D.
-0.1
+0.4
+0.2
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.4
N.D.
+0.1
+0.1
-0.3
stress
KB with Rifampicin 0.1 mg/ml
+0.4
N.D.
+0.0
-0.4
+0.4
stress
KB with Solanesol 10 mM
-0.2
N.D.
+0.2
-0.1
+0.6
stress
KB with Trimethoprim 15.6 ug/ml
+0.3
N.D.
-0.1
+0.4
+0.1
stress
KB with Diallyl sulfide 10 mM
+0.6
N.D.
+0.0
+0.2
-0.1
stress
KB with Sinomenine 10 mM
+0.1
N.D.
+0.0
+0.3
+0.5
stress
KB with Harmine 10 mM
+0.2
N.D.
-0.0
+0.2
+0.6
stress
KB with L-alliin 10 mM
+0.5
N.D.
+0.1
+0.2
+0.1
stress
KB with Usnic Acid 10 mM
+0.2
N.D.
+0.0
+0.2
+0.6
stress
KB with Tetracycline 0.0015 ug/ml
+0.5
N.D.
-0.2
+0.2
+0.6
stress
KB with Methyl-2-Hydroxy-Phenylproprionate 10 mM
-0.0
N.D.
+0.0
+0.7
+0.4
stress
KB with Carbenicillin 3.1 ug/ml
+0.2
N.D.
-0.2
+0.3
+0.8
stress
KB with Anabasine Hydrochloride 10 mM
+0.2
N.D.
+0.0
+0.5
+0.7
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