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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1322 and Psyr_1323 are separated by 133 nucleotides
Psyr_1323 and Psyr_1324 are separated by 36 nucleotides
Psyr_1324 and Psyr_1325 are separated by 96 nucleotides
Psyr_1325 and Psyr_1326 are separated by 71 nucleotides
Psyr_1322: Psyr_1322 - Protein of unknown function DUF72, at 1,500,043 to 1,500,906
_1322
Psyr_1323: Psyr_1323 - Extensin-like, C-terminal, at 1,501,040 to 1,501,729
_1323
Psyr_1324: Psyr_1324 - conserved hypothetical protein, at 1,501,766 to 1,502,389
_1324
Psyr_1325: Psyr_1325 - Protein of unknown function DUF548, at 1,502,486 to 1,503,295
_1325
Psyr_1326: Psyr_1326 - conserved hypothetical protein, at 1,503,367 to 1,504,056
_1326
Group
Condition
Psyr
_1322
Psyr
_1323
Psyr
_1324
Psyr
_1325
Psyr
_1326
stress
KB with Acriflavine 1.25 ug/ml
-0.7
-0.1
-0.5
-0.3
-0.3
stress
KB with Novobiocin 7.75 ug/ml
-0.2
-0.1
-0.9
+0.0
-0.1
stress
KB with Escin 10 mM
-0.5
-0.0
-0.6
-0.3
+0.2
stress
KB with Erythromycin 6.25 ug/ml
-0.6
-0.2
-0.3
-0.1
+0.1
stress
KB with Terpene 10 mM
-0.3
-0.0
-0.2
-0.5
-0.0
stress
KB with Harmol 10 mM
-0.4
+0.1
-0.1
-0.8
+0.2
stress
KB with Harmine 10 mM
-0.3
+0.1
-0.6
-0.3
+0.2
stress
KB with Gamma-Aminobutyric Acid Hydrochloride 10 mM
-0.2
-0.2
-0.2
-0.3
+0.2
stress
KB with Conessine 10 mM
-0.2
+0.1
+0.2
-0.6
-0.3
stress
KB with Benzalkonium chloride 1.55 ug/ml
-0.3
-0.2
-0.4
+0.1
+0.2
stress
KB with Quercetin 360 ug/ml
+0.1
+0.1
-0.5
-0.5
+0.2
in planta
Green bean; epiphytic
-0.0
+0.1
-0.3
-0.6
+0.3
kb
KB
-0.1
-0.1
-0.6
+0.3
+0.0
stress
KB with Acridine orange 3.125 ug/ml
-0.1
-0.2
-0.5
+0.1
+0.3
stress
KB with Tetracycline 0.0015 ug/ml
-0.1
+0.1
-0.5
-0.0
+0.3
stress
KB with Harmol Hydrochloride 10 mM
-0.1
-0.3
+0.3
-0.3
+0.1
stress
KB with Trimethoprim 15.6 ug/ml
-0.3
-0.2
-0.1
+0.4
-0.0
in planta
Green bean; epiphytic
+0.2
+0.2
+0.2
-0.6
-0.1
stress
KB with Rotenone 0.125 mg/ml
+0.3
+0.0
-0.4
-0.1
+0.2
stress
KB with Methanol 5 vol%
+0.2
+0.1
-0.5
+0.2
+0.2
stress
KB with Methyl-2-Hydroxy-Phenylproprionate 10 mM
-0.1
-0.4
+0.2
+0.4
+0.1
stress
KB with Strychnine Sulfate 10 mM
+0.2
-0.5
+0.1
+0.2
+0.2
stress
KB with Anethole 10 mM
+0.2
+0.1
+0.3
+0.1
-0.3
stress
KB with Carbenicillin 3.1 ug/ml
-0.2
+0.3
+0.2
-0.2
+0.4
stress
KB with Gossypol-Acetic Acid Complex 10 mM
-0.0
-0.3
+0.3
+0.2
+0.3
in planta
epiphytic; Lima bean
+0.1
-0.7
+0.7
+0.2
+0.2
in planta
apoplastic, chopping recovery; Green bean
-0.0
-0.1
-0.2
+0.4
+0.4
stress
KB with Palmatine 10 mM
+0.3
+0.3
+0.4
-0.3
+0.0
in planta
epiphytic; Lima bean
+0.0
-0.1
+0.7
+0.4
+0.4
stress
KB with Mitomycin C 0.05 ug/ml
-0.1
+0.4
-0.2
+1.0
+0.6
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