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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1292 and Psyr_1293 are separated by 32 nucleotides
Psyr_1293 and Psyr_1294 overlap by 28 nucleotides
Psyr_1294 and Psyr_1295 are separated by 289 nucleotides
Psyr_1295 and Psyr_1296 are separated by 171 nucleotides
Psyr_1292: Psyr_1292 - multi-sensor hybrid histidine kinase, at 1,457,808 to 1,461,437
_1292
Psyr_1293: Psyr_1293 - EAL:Response regulator receiver, at 1,461,470 to 1,462,831
_1293
Psyr_1294: Psyr_1294 - regulatory protein, LuxR:Response regulator receiver, at 1,462,804 to 1,463,466
_1294
Psyr_1295: Psyr_1295 - conserved domain protein, at 1,463,756 to 1,464,052
_1295
Psyr_1296: Psyr_1296 - conserved hypothetical protein, at 1,464,224 to 1,465,102
_1296
Group
Condition
Psyr
_1292
Psyr
_1293
Psyr
_1294
Psyr
_1295
Psyr
_1296
in planta
epiphytic; Lima bean
+0.0
-0.2
-3.9
-0.9
-0.1
stress
KB with Levodopa 10 mM
+0.1
-0.4
-0.2
-0.5
+0.3
stress
KB with Methyl-2-Hydroxy-Phenylproprionate 10 mM
+0.1
+0.1
-0.8
+0.1
+0.3
in planta
apoplastic; Green bean; 6 days
+0.1
+0.0
+0.6
-0.6
+0.2
in planta
apoplastic; Green bean; 6 days
+0.1
+0.2
+0.6
-0.5
-0.0
stress
KB with Avocadyne 10 mM
+0.1
-0.1
+0.6
-0.5
+0.3
stress
KB with Acriflavine 1.25 ug/ml
-0.0
-0.3
+0.2
+0.6
+0.2
stress
KB with Anethole 10 mM
+0.1
+0.1
+0.8
-0.4
+0.2
stress
KB with Biochanin a diacetate 10 mM
+0.1
-0.2
+0.9
+0.1
-0.0
stress
KB with Chaulmoogric 10 mM
+0.2
+0.0
+0.8
-0.3
+0.3
in planta
apoplastic, chopping recovery; Green bean
+0.1
+0.0
+1.1
-0.1
-0.1
stress
KB with Emodin 10 mM
+0.1
-0.2
+0.7
-0.0
+0.4
stress
KB with Sclareolide 10 mM
+0.1
-0.2
+0.6
+0.1
+0.5
stress
KB with Auraptene 10 mM
+0.2
-0.1
+0.9
-0.1
+0.2
kb
KB
-0.0
+0.2
+0.7
+0.2
+0.1
stress
KB with Piperine 10 mM
+0.1
+0.1
+0.5
+0.2
+0.4
stress
KB with Solanesol 10 mM
+0.2
+0.2
+0.6
-0.1
+0.5
stress
KB with Tetracycline 0.0015 ug/ml
+0.0
-0.1
+0.6
+0.5
+0.4
kb
KB
+0.1
-0.1
+0.4
+0.6
+0.4
stress
KB with Phloretin 125 ug/ml
+0.2
+0.0
+0.4
+0.4
+0.4
stress
KB with Terpene 10 mM
-0.0
-0.2
+1.0
+0.3
+0.4
stress
KB with Harmol 10 mM
+0.2
+0.2
+0.7
-0.1
+0.5
in planta
apoplastic, chopping recovery; Green bean
+0.0
+0.0
+1.3
+0.1
-0.1
in planta
apoplastic, chopping recovery; Green bean
+0.1
-0.0
+1.5
-0.2
+0.1
stress
KB with Prenyletin 10 mM
+0.1
-0.2
+1.1
-0.0
+0.3
stress
KB with Helenine 10 mM
+0.1
-0.1
+0.8
+0.2
+0.4
stress
KB with Conessine 10 mM
+0.1
-0.0
+1.0
+0.3
+0.3
in planta
apoplastic, chopping recovery; Green bean
+0.2
+0.1
+1.7
-0.0
+0.0
stress
KB with Acridine orange 3.125 ug/ml
-0.1
+0.2
+0.5
+0.8
+0.7
stress
KB with Mitomycin C 0.05 ug/ml
-0.2
+0.0
+1.0
+1.1
+0.6
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