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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1228 and Psyr_1229 are separated by 53 nucleotides
Psyr_1229 and Psyr_1230 are separated by 63 nucleotides
Psyr_1230 and Psyr_1231 are separated by 9 nucleotides
Psyr_1231 and Psyr_1232 are separated by 108 nucleotides
Psyr_1228: Psyr_1228 - tRNA-guanine transglycosylase, at 1,386,415 to 1,387,548
_1228
Psyr_1229: Psyr_1229 - protein translocase subunit yajC, at 1,387,602 to 1,387,937
_1229
Psyr_1230: Psyr_1230 - SecD/SecF/SecDF export membrane protein:SecD export membrane protein, at 1,388,001 to 1,389,869
_1230
Psyr_1231: Psyr_1231 - protein translocase subunit secF, at 1,389,879 to 1,390,790
_1231
Psyr_1232: Psyr_1232 - conserved hypothetical protein, at 1,390,899 to 1,391,438
_1232
Group
Condition
Psyr
_1228
Psyr
_1229
Psyr
_1230
Psyr
_1231
Psyr
_1232
stress
KB with Palmatine chloride 10 mM
N.D.
N.D.
N.D.
N.D.
+0.3
stress
KB with Harmine 10 mM
N.D.
N.D.
N.D.
N.D.
+0.3
stress
KB with Chaulmoogric 10 mM
N.D.
N.D.
N.D.
N.D.
+0.3
stress
KB with Sclareolide 10 mM
N.D.
N.D.
N.D.
N.D.
+0.3
stress
KB with Emodin 10 mM
N.D.
N.D.
N.D.
N.D.
+0.3
stress
KB with Harmol 10 mM
N.D.
N.D.
N.D.
N.D.
+0.3
stress
KB with Veratrine 10 mM
N.D.
N.D.
N.D.
N.D.
+0.3
stress
KB with Benzalkonium chloride 1.55 ug/ml
N.D.
N.D.
N.D.
N.D.
+0.3
stress
KB with Palmatine 10 mM
N.D.
N.D.
N.D.
N.D.
+0.3
stress
KB with Totarol 10 mM
N.D.
N.D.
N.D.
N.D.
+0.3
stress
KB with Biochanin a diacetate 10 mM
N.D.
N.D.
N.D.
N.D.
+0.3
stress
KB with Piperic 10 mM
N.D.
N.D.
N.D.
N.D.
+0.3
stress
KB with Gossypetin 10 mM
N.D.
N.D.
N.D.
N.D.
+0.3
stress
KB with Paclitaxel 10 mM
N.D.
N.D.
N.D.
N.D.
+0.3
stress
KB with d-limonene 10 mM
N.D.
N.D.
N.D.
N.D.
+0.3
stress
KB with Solanesol 10 mM
N.D.
N.D.
N.D.
N.D.
+0.3
stress
KB with Auraptene 10 mM
N.D.
N.D.
N.D.
N.D.
+0.4
stress
KB with Physcion 10 mM
N.D.
N.D.
N.D.
N.D.
+0.4
stress
KB with Helenine 10 mM
N.D.
N.D.
N.D.
N.D.
+0.4
stress
KB with Nonanoic 10 mM
N.D.
N.D.
N.D.
N.D.
+0.4
stress
KB with Diallyl sulfide 10 mM
N.D.
N.D.
N.D.
N.D.
+0.4
stress
KB with 4-acetoxyphenol 10 mM
N.D.
N.D.
N.D.
N.D.
+0.4
stress
KB with Anethole 10 mM
N.D.
N.D.
N.D.
N.D.
+0.4
stress
KB with Piperine 10 mM
N.D.
N.D.
N.D.
N.D.
+0.4
stress
KB with Hydrastine (1R, 9S) 10 mM
N.D.
N.D.
N.D.
N.D.
+0.4
stress
KB with Conessine 10 mM
N.D.
N.D.
N.D.
N.D.
+0.4
stress
KB with Prenyletin 10 mM
N.D.
N.D.
N.D.
N.D.
+0.4
stress
KB with Levodopa 10 mM
N.D.
N.D.
N.D.
N.D.
+0.5
stress
KB with Mitomycin C 0.05 ug/ml
N.D.
N.D.
N.D.
N.D.
+0.5
stress
KB with Carbenicillin 3.1 ug/ml
N.D.
N.D.
N.D.
N.D.
+0.5
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