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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_RNA20 and Psyr_1227 are separated by 117 nucleotides
Psyr_1227 and Psyr_1228 overlap by 4 nucleotides
Psyr_1228 and Psyr_1229 are separated by 53 nucleotides
Psyr_1229 and Psyr_1230 are separated by 63 nucleotides
Psyr_RNA20: Psyr_RNA20 - tRNA-Leu, at 1,385,152 to 1,385,236
_RNA20
Psyr_1227: Psyr_1227 - Queuosine biosynthesis protein, at 1,385,354 to 1,386,418
_1227
Psyr_1228: Psyr_1228 - tRNA-guanine transglycosylase, at 1,386,415 to 1,387,548
_1228
Psyr_1229: Psyr_1229 - protein translocase subunit yajC, at 1,387,602 to 1,387,937
_1229
Psyr_1230: Psyr_1230 - SecD/SecF/SecDF export membrane protein:SecD export membrane protein, at 1,388,001 to 1,389,869
_1230
Group
Condition
Psyr
_RNA20
Psyr
_1227
Psyr
_1228
Psyr
_1229
Psyr
_1230
in planta
epiphytic; Lima bean
N.D.
-2.2
N.D.
N.D.
N.D.
stress
KB with Emodin 10 mM
N.D.
-1.9
N.D.
N.D.
N.D.
stress
KB with Tetracycline 0.0015 ug/ml
N.D.
-1.7
N.D.
N.D.
N.D.
stress
KB with Harmol 10 mM
N.D.
-1.6
N.D.
N.D.
N.D.
stress
KB with Helenine 10 mM
N.D.
-1.5
N.D.
N.D.
N.D.
stress
KB with Palmatine chloride 10 mM
N.D.
-1.4
N.D.
N.D.
N.D.
stress
KB with Dimethyl Sulfoxide 1.25 vol%
N.D.
-1.3
N.D.
N.D.
N.D.
stress
KB with 4-hydroxychalcone 10 mM
N.D.
-1.2
N.D.
N.D.
N.D.
stress
KB with Totarol 10 mM
N.D.
-1.2
N.D.
N.D.
N.D.
in planta
apoplastic; Green bean; 6 days
N.D.
-1.2
N.D.
N.D.
N.D.
stress
KB with Nitrofurantoin 0.0625 mg/ml
N.D.
-1.2
N.D.
N.D.
N.D.
stress
KB with Curcumin 10 mM
N.D.
-1.2
N.D.
N.D.
N.D.
stress
KB with Ampicillin 0.775 ug/ml
N.D.
-1.1
N.D.
N.D.
N.D.
stress
KB with Conessine 10 mM
N.D.
-1.1
N.D.
N.D.
N.D.
kb
KB
N.D.
-1.0
N.D.
N.D.
N.D.
stress
KB with Sclareolide 10 mM
N.D.
-0.9
N.D.
N.D.
N.D.
stress
KB with Acriflavine 1.25 ug/ml
N.D.
-0.9
N.D.
N.D.
N.D.
stress
KB with Veratrine 10 mM
N.D.
-0.9
N.D.
N.D.
N.D.
stress
KB with Rotenone 0.25 mg/ml
N.D.
-0.8
N.D.
N.D.
N.D.
stress
KB with Gamma-Aminobutyric Acid Hydrochloride 10 mM
N.D.
-0.8
N.D.
N.D.
N.D.
stress
KB with Cantharidin 10 mM
N.D.
-0.8
N.D.
N.D.
N.D.
stress
KB with Lawsone 10 mM
N.D.
-0.8
N.D.
N.D.
N.D.
in planta
Green bean; epiphytic
N.D.
-0.8
N.D.
N.D.
N.D.
in planta
Green bean; epiphytic
N.D.
-0.8
N.D.
N.D.
N.D.
stress
KB with L-alliin 10 mM
N.D.
-0.8
N.D.
N.D.
N.D.
stress
KB with Physcion 10 mM
N.D.
-0.8
N.D.
N.D.
N.D.
stress
KB with Paclitaxel 10 mM
N.D.
-0.8
N.D.
N.D.
N.D.
stress
KB with Solanesol 10 mM
N.D.
-0.8
N.D.
N.D.
N.D.
stress
KB with Carbenicillin 3.1 ug/ml
N.D.
+0.8
N.D.
N.D.
N.D.
stress
KB with Novobiocin 7.75 ug/ml
N.D.
+1.1
N.D.
N.D.
N.D.
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