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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1164 and Psyr_1165 are separated by 2 nucleotides
Psyr_1165 and Psyr_1166 are separated by 4 nucleotides
Psyr_1166 and Psyr_1167 are separated by 27 nucleotides
Psyr_1167 and Psyr_1168 overlap by 8 nucleotides
Psyr_1164: Psyr_1164 - nucleoside ABC transporter ATP-binding protein, at 1,317,414 to 1,318,949
_1164
Psyr_1165: Psyr_1165 - Isochorismatase hydrolase, at 1,318,952 to 1,319,638
_1165
Psyr_1166: Psyr_1166 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase, at 1,319,643 to 1,320,659
_1166
Psyr_1167: Psyr_1167 - nucleoside ABC transporter membrane protein, at 1,320,687 to 1,321,607
_1167
Psyr_1168: Psyr_1168 - nucleoside ABC transporter membrane protein, at 1,321,600 to 1,322,709
_1168
Group
Condition
Psyr
_1164
Psyr
_1165
Psyr
_1166
Psyr
_1167
Psyr
_1168
in planta
apoplastic; Green bean; 6 days
+0.6
N.D.
-0.1
-2.2
-0.1
stress
KB with Piperine 10 mM
-0.1
N.D.
+0.1
-2.0
+0.3
in planta
Green bean; epiphytic
-0.5
N.D.
+0.1
-1.3
+0.1
stress
KB with Nalidixic 0.775 ug/ml
-0.3
N.D.
+0.1
-1.2
-0.0
kb
KB
-0.0
N.D.
-0.1
-0.9
-0.0
stress
KB with Veratrine 10 mM
-0.2
N.D.
-0.2
-0.6
-0.1
stress
KB with Rotenone 0.125 mg/ml
+0.2
N.D.
-0.1
-1.1
+0.0
stress
KB with Hydrastine (1R, 9S) 10 mM
-0.3
N.D.
-0.0
-0.6
+0.2
stress
KB with Usnic Acid 10 mM
+0.3
N.D.
-0.1
-0.9
+0.1
stress
KB with Nitrofurantoin 0.0625 mg/ml
+0.2
N.D.
+0.1
-0.9
-0.0
stress
KB with Carbenicillin 3.1 ug/ml
-0.1
N.D.
+0.4
-0.7
-0.1
stress
KB with Nonanoic 10 mM
+0.4
N.D.
+0.1
-1.1
+0.2
stress
KB with Totarol 10 mM
-0.3
N.D.
-0.2
+0.4
-0.2
stress
KB with Terpene 10 mM
-0.1
N.D.
+0.3
-0.6
+0.1
in planta
apoplastic; Green bean; 6 days
+0.7
N.D.
-0.1
-0.8
-0.0
stress
KB with Benzalkonium chloride 1.55 ug/ml
+0.3
N.D.
+0.1
-0.6
+0.1
stress
KB with L-alliin 10 mM
-0.4
N.D.
+0.0
+0.7
-0.0
stress
KB with Paclitaxel 10 mM
-0.1
N.D.
-0.1
+0.8
-0.1
stress
KB with Ampicillin 0.775 ug/ml
-0.1
N.D.
+0.2
+0.7
+0.1
stress
KB with Harmol 10 mM
+0.2
N.D.
+0.0
+0.6
+0.3
stress
KB with Chrysophanol 10 mM
+0.2
N.D.
+0.3
+0.6
+0.1
in planta
apoplastic, chopping recovery; Green bean
+0.5
N.D.
+0.2
+0.6
-0.1
stress
KB with Conessine 10 mM
+0.2
N.D.
-0.2
+1.2
+0.1
in planta
epiphytic; Lima bean
-0.2
N.D.
+0.2
+1.2
-0.0
in planta
Green bean; epiphytic
-0.4
N.D.
+0.3
+1.4
-0.0
stress
KB with Diallyl sulfide 10 mM
+0.1
N.D.
+0.1
+0.9
+0.2
in planta
apoplastic, chopping recovery; Green bean
+0.4
N.D.
+0.1
+0.9
+0.1
in planta
apoplastic, chopping recovery; Green bean
+0.5
N.D.
+0.1
+1.3
+0.1
stress
KB with Mitomycin C 0.05 ug/ml
-0.1
N.D.
+0.4
+4.4
+0.3
stress
KB with Acridine orange 3.125 ug/ml
+0.3
N.D.
+0.0
+5.2
+0.5
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