Fitness for 5 genes in Pseudomonas syringae pv. syringae B728a ΔmexB

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 94 experiments or choose conditions or try the comparative fitness browser

500 ntPsyr_1107 and Psyr_1108 are separated by 137 nucleotidesPsyr_1108 and Psyr_1109 are separated by 219 nucleotidesPsyr_1109 and Psyr_1110 overlap by 4 nucleotidesPsyr_1110 and Psyr_1111 are separated by 50 nucleotides Psyr_1107: Psyr_1107 - Sigma-70 region 2, at 1,254,157 to 1,254,720 _1107 Psyr_1108: Psyr_1108 - glyceraldehyde-3-phosphate dehydrogenase, at 1,254,858 to 1,255,859 _1108 Psyr_1109: Psyr_1109 - 6-phosphogluconate dehydratase, at 1,256,079 to 1,257,905 _1109 Psyr_1110: Psyr_1110 - glucokinase, at 1,257,902 to 1,258,867 _1110 Psyr_1111: Psyr_1111 - Response regulator receiver:Transcriptional regulatory protein, C-terminal, at 1,258,918 to 1,259,655 _1111
Group Condition Psyr_1107 Psyr_1108 Psyr_1109 Psyr_1110 Psyr_1111
in planta epiphytic; Lima bean -0.4 -2.0 -0.7 -0.1 -0.4
in planta Green bean; epiphytic -0.3 -1.4 -1.3 -0.5 +0.4
in planta Green bean; epiphytic +0.2 -1.5 -1.0 -0.2 -0.2
stress KB with Acridine orange 3.125 ug/ml +0.1 -0.7 -0.9 -0.1 -0.9
in planta epiphytic; Lima bean -0.3 -1.4 -0.5 -0.4 +0.2
stress KB with Rotenone 0.25 mg/ml +0.3 -0.8 -0.4 -0.1 -0.9
in planta apoplastic; Green bean; 6 days +0.4 -0.7 -1.3 -0.4 +0.0
stress KB with Tetracycline 0.0015 ug/ml -0.1 -1.1 -0.5 -0.1 -0.0
stress KB with Berberine 15.6 ug/ml -0.0 -0.5 -0.8 -0.2 -0.3
in planta apoplastic; Green bean; 6 days +0.4 -0.6 -0.9 -0.3 -0.2
stress KB with Harmine 10 mM -0.2 -0.4 -0.6 -0.2 -0.2
stress KB with Escin 10 mM +0.0 -0.4 -0.4 -0.1 -0.6
stress KB with Dimethyl Sulfoxide 0.42 vol% +0.2 -0.9 -0.5 -0.1 -0.2
stress KB with capsaicin 0.125 mg/ml +0.1 -0.7 -0.4 -0.2 -0.2
stress KB with Phloretin 125 ug/ml +0.1 -0.7 -0.7 -0.2 +0.4
stress KB with Nitrofurantoin 31.25 ug/ml +0.2 -0.6 -0.6 -0.2 +0.0
stress KB with Ampicillin 0.775 ug/ml +0.2 -0.7 -0.4 -0.1 -0.2
stress KB with Dimethyl Sulfoxide 1.25 vol% +0.3 -0.7 -0.1 -0.1 -0.5
stress KB with Mitomycin C 0.05 ug/ml +0.2 -0.9 -0.1 -0.0 -0.3
stress KB with Acriflavine 1.25 ug/ml +0.5 -0.5 -0.6 -0.3 -0.2
stress KB with Benzalkonium chloride 1.55 ug/ml +0.4 -1.0 -0.1 -0.2 -0.1
stress KB with Nitrofurantoin 0.0625 mg/ml +0.4 -0.6 -0.2 -0.1 -0.3
stress KB with Piperacillin 0.775 ug/ml +0.5 -0.7 -0.3 -0.1 +0.1
stress KB with Flavone 0.125 mg/ml +0.5 -0.5 -0.4 -0.0 -0.2
in planta apoplastic, chopping recovery; Green bean +0.2 -0.4 -0.5 -0.3 +0.6
in planta apoplastic, chopping recovery; Green bean +0.1 -0.4 -0.7 -0.0 +0.9
in planta apoplastic, chopping recovery; Green bean +0.1 -0.3 -0.5 -0.0 +1.0
stress KB with Curcumin 10 mM -0.7 +0.0 +0.1 +0.1 +0.7
stress KB with Conessine 10 mM -0.5 -0.2 -0.1 +0.0 +1.2
in planta apoplastic, chopping recovery; Green bean +0.1 -0.2 -0.6 +0.0 +1.3
remove
Psyr_1107
plot		 remove
Psyr_1108
plot		 remove
Psyr_1109		 remove
Psyr_1110
plot		 remove
Psyr_1111
plot