Fitness for 5 genes in Pseudomonas syringae pv. syringae B728a ΔmexB

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 94 experiments or choose conditions or try the comparative fitness browser

500 ntPsyr_1100 and Psyr_1101 are separated by 170 nucleotidesPsyr_1101 and Psyr_1102 are separated by 695 nucleotidesPsyr_1102 and Psyr_1103 are separated by 98 nucleotidesPsyr_1103 and Psyr_1104 overlap by 4 nucleotides Psyr_1100: Psyr_1100 - PAS/PAC sensor signal transduction histidine kinase, at 1,244,685 to 1,246,415 _1100 Psyr_1101: Psyr_1101 - Helix-turn-helix, Fis-type, at 1,246,586 to 1,248,094 _1101 Psyr_1102: Psyr_1102 - conserved hypothetical protein, at 1,248,790 to 1,249,146 _1102 Psyr_1103: Psyr_1103 - Protein of unknown function DUF454, at 1,249,245 to 1,249,703 _1103 Psyr_1104: Psyr_1104 - Heme oxygenase, at 1,249,700 to 1,250,314 _1104
Group Condition Psyr_1100 Psyr_1101 Psyr_1102 Psyr_1103 Psyr_1104
stress KB with Piperic 10 mM -0.1 +0.2 -0.6 +0.0 -0.2
stress KB with Palmatine chloride 10 mM -0.1 +0.1 -0.3 +0.1 -0.5
stress KB with Lawsone 10 mM +0.1 +0.3 -0.2 +0.4 -0.9
in planta epiphytic; Lima bean -0.1 +0.2 -0.2 +0.2 -0.5
stress KB with Palmatine 10 mM -0.1 +0.3 -1.1 -0.1 +0.6
stress KB with Auraptene 10 mM -0.2 +0.3 +0.1 +0.1 -0.5
stress KB with Conessine 10 mM +0.1 +0.3 -0.5 -0.3 +0.3
stress KB with 4-acetoxyphenol 10 mM +0.2 +0.3 -0.3 +0.0 -0.4
in planta Green bean; epiphytic +0.0 +0.2 +0.4 +0.1 -0.9
in planta apoplastic, chopping recovery; Green bean +0.1 +0.1 +0.5 -0.2 -0.6
stress KB with Mitomycin C 0.05 ug/ml -0.0 -0.4 -0.2 +0.3 +0.3
stress KB with Diallyl sulfide 10 mM +0.0 +0.2 -0.9 +0.1 +0.5
stress KB with Avocatin A 10 mM -0.2 +0.2 -0.7 +0.0 +0.7
stress KB with Gamma-Aminobutyric Acid Hydrochloride 10 mM +0.1 -0.3 -0.3 +0.4 +0.1
stress KB with Nalidixic 0.775 ug/ml -0.0 +0.0 +0.1 -0.5 +0.5
stress KB with Acridine orange 3.125 ug/ml -0.0 -0.3 -0.2 +0.7 -0.1
stress KB with Harmol Hydrochloride 10 mM +0.1 +0.0 -0.4 +0.4 +0.3
stress KB with Cotarnine Chloride 10 mM +0.1 +0.2 +0.3 +0.3 -0.6
stress KB with Avocadyne 10 mM +0.1 -0.2 -0.2 +0.2 +0.5
stress KB with Solanesol 10 mM +0.1 +0.3 -0.5 +0.2 +0.3
stress KB with Paclitaxel 10 mM +0.0 +0.3 -0.6 +0.2 +0.6
stress KB with Helenine 10 mM +0.0 +0.4 -0.3 +0.1 +0.4
stress KB with Berberine 15.6 ug/ml -0.2 +0.2 -0.1 -0.1 +0.9
stress KB with Gossypetin 10 mM +0.0 +0.5 -0.2 -0.2 +0.6
stress KB with Chaulmoogric 10 mM +0.1 +0.2 -0.2 +0.1 +0.5
stress KB with Prenyletin 10 mM +0.0 +0.4 -0.3 +0.2 +0.4
stress KB with Oxedrine 10 mM +0.4 -0.1 +0.4 -0.1 +0.4
stress KB with Levodopa 10 mM -0.1 +0.3 -0.0 +0.2 +0.8
stress KB with Carbenicillin 3.1 ug/ml +0.2 -0.3 +0.2 +0.4 +0.7
stress KB with Benzalkonium chloride 1.55 ug/ml +0.0 +0.1 -0.0 +0.5 +0.7
remove
Psyr_1100
plot		 remove
Psyr_1101
plot		 remove
Psyr_1102		 remove
Psyr_1103
plot		 remove
Psyr_1104
plot