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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1097 and Psyr_1098 are separated by 325 nucleotides
Psyr_1098 and Psyr_1099 are separated by 9 nucleotides
Psyr_1099 and Psyr_1100 overlap by 16 nucleotides
Psyr_1100 and Psyr_1101 are separated by 170 nucleotides
Psyr_1097: Psyr_1097 - glycine cleavage system H protein, at 1,241,475 to 1,241,858
_1097
Psyr_1098: Psyr_1098 - response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s), at 1,242,184 to 1,244,301
_1098
Psyr_1099: Psyr_1099 - Response regulator receiver, at 1,244,311 to 1,244,700
_1099
Psyr_1100: Psyr_1100 - PAS/PAC sensor signal transduction histidine kinase, at 1,244,685 to 1,246,415
_1100
Psyr_1101: Psyr_1101 - Helix-turn-helix, Fis-type, at 1,246,586 to 1,248,094
_1101
Group
Condition
Psyr
_1097
Psyr
_1098
Psyr
_1099
Psyr
_1100
Psyr
_1101
stress
KB with Anabasine Hydrochloride 10 mM
-0.7
-0.3
+0.1
+0.0
-0.1
stress
KB with Methyl-2-Hydroxy-Phenylproprionate 10 mM
-0.8
-0.1
+0.1
+0.2
-0.1
stress
KB with Berberine 15.6 ug/ml
-0.7
+0.1
+0.2
-0.2
+0.2
stress
KB with Oxedrine 10 mM
-0.7
-0.1
+0.2
+0.4
-0.1
stress
KB with Avocadene 10 mM
-0.6
-0.1
+0.1
+0.1
+0.2
stress
KB with Acridine orange 3.125 ug/ml
+0.3
+0.2
-0.3
-0.0
-0.3
stress
KB with D-Salicin 240 ug/ml
-0.5
+0.1
+0.3
+0.1
-0.0
stress
KB with Carbenicillin 3.1 ug/ml
-0.4
+0.2
+0.3
+0.2
-0.3
stress
KB with capsaicin 0.125 mg/ml
+0.6
-0.1
-0.0
-0.0
-0.3
stress
KB with Auraptene 10 mM
+0.7
-0.3
-0.1
-0.2
+0.3
stress
KB with Physcion 10 mM
+0.4
-0.1
-0.3
+0.0
+0.4
in planta
apoplastic, chopping recovery; Green bean
+0.5
+0.3
-0.1
-0.1
-0.2
in planta
apoplastic; Green bean; 6 days
-0.7
+0.4
+0.2
+0.3
+0.3
stress
KB with Anethole 10 mM
+0.5
-0.1
-0.1
-0.1
+0.3
in planta
apoplastic; Green bean; 6 days
-0.4
+0.2
+0.2
+0.4
+0.2
stress
KB with Conessine 10 mM
+0.5
-0.1
-0.0
+0.1
+0.3
in planta
epiphytic; Lima bean
+0.9
+0.1
-0.3
-0.1
+0.2
stress
KB with Lupeol 10 mM
+0.7
-0.2
+0.2
-0.1
+0.3
stress
KB with Palmatine chloride 10 mM
+0.9
-0.1
+0.1
-0.1
+0.1
stress
KB with Piperine 10 mM
+0.5
-0.0
+0.3
-0.1
+0.3
stress
KB with Nonanoic 10 mM
+0.6
-0.1
+0.1
+0.0
+0.3
stress
KB with Piperic 10 mM
+0.6
+0.1
+0.1
-0.1
+0.2
stress
KB with Levodopa 10 mM
+0.5
+0.2
+0.2
-0.1
+0.3
stress
KB with Paclitaxel 10 mM
+0.7
-0.1
+0.2
+0.0
+0.3
stress
KB with Emodin 10 mM
+0.6
+0.0
+0.3
-0.1
+0.3
stress
KB with Lawsone 10 mM
+0.6
-0.1
+0.2
+0.1
+0.3
stress
KB with d-limonene 10 mM
+0.6
+0.1
+0.3
+0.0
+0.2
stress
KB with Biochanin a diacetate 10 mM
+0.7
+0.1
+0.2
+0.0
+0.3
kb
KB
+1.0
-0.0
+0.2
+0.2
+0.2
stress
KB with 4-acetoxyphenol 10 mM
+0.6
+0.1
+0.4
+0.2
+0.3
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