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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1088 and Psyr_1089 are separated by 43 nucleotides
Psyr_1089 and Psyr_1090 are separated by 7 nucleotides
Psyr_1090 and Psyr_1091 are separated by 57 nucleotides
Psyr_1091 and Psyr_1092 are separated by 319 nucleotides
Psyr_1088: Psyr_1088 - CDS, at 1,230,953 to 1,231,684
_1088
Psyr_1089: Psyr_1089 - conserved hypothetical protein, at 1,231,728 to 1,232,162
_1089
Psyr_1090: Psyr_1090 - DNA polymerase III, chi subunit, at 1,232,170 to 1,232,598
_1090
Psyr_1091: Psyr_1091 - aminopeptidase A, Metallo peptidase, MEROPS family M17, at 1,232,656 to 1,234,146
_1091
Psyr_1092: Psyr_1092 - permease YjgP/YjgQ, at 1,234,466 to 1,235,593
_1092
Group
Condition
Psyr
_1088
Psyr
_1089
Psyr
_1090
Psyr
_1091
Psyr
_1092
stress
KB with Acridine orange 3.125 ug/ml
-0.4
N.D.
-2.2
-0.5
N.D.
stress
KB with Erythromycin 6.25 ug/ml
-0.2
N.D.
-1.8
-1.0
N.D.
stress
KB with Acriflavine 1.25 ug/ml
+0.0
N.D.
-0.4
-1.8
N.D.
stress
KB with Mitomycin C 0.05 ug/ml
-0.3
N.D.
-0.8
-0.9
N.D.
stress
KB with Trimethoprim 15.6 ug/ml
-0.2
N.D.
-0.3
-1.5
N.D.
stress
KB with Berberine 15.6 ug/ml
-0.1
N.D.
-0.9
-0.9
N.D.
stress
KB with Gossypol-Acetic Acid Complex 10 mM
-0.3
N.D.
-0.7
-0.7
N.D.
in planta
epiphytic; Lima bean
-0.3
N.D.
-1.4
+0.1
N.D.
stress
KB with Carbenicillin 3.1 ug/ml
-0.2
N.D.
-0.5
-0.9
N.D.
stress
KB with Methyl-2-Hydroxy-Phenylproprionate 10 mM
-0.2
N.D.
-0.8
-0.5
N.D.
stress
KB with Nalidixic 0.775 ug/ml
+0.0
N.D.
-0.3
-1.1
N.D.
kb
KB
-0.1
N.D.
-0.1
-1.1
N.D.
stress
KB with Palmatine 10 mM
-0.1
N.D.
-0.2
-0.9
N.D.
in planta
epiphytic; Lima bean
-0.3
N.D.
-0.3
-0.6
N.D.
stress
KB with Harmol Hydrochloride 10 mM
+0.1
N.D.
-0.4
-1.0
N.D.
stress
KB with Cantharidin 10 mM
-0.2
N.D.
-0.7
-0.3
N.D.
stress
KB with Quercetin 360 ug/ml
-0.2
N.D.
-0.3
-0.8
N.D.
stress
KB with Ampicillin 0.775 ug/ml
-0.1
N.D.
-0.2
-0.9
N.D.
stress
KB with Nitrofurantoin 31.25 ug/ml
-0.0
N.D.
-0.6
-0.6
N.D.
stress
KB with Dimethyl Sulfoxide 0.42 vol%
-0.1
N.D.
-0.4
-0.6
N.D.
stress
KB with Sclareolide 10 mM
-0.2
N.D.
-0.4
-0.6
N.D.
stress
KB with Harmol 10 mM
-0.1
N.D.
-0.8
-0.3
N.D.
stress
KB with Anabasine Hydrochloride 10 mM
-0.1
N.D.
-0.5
-0.6
N.D.
stress
KB with Palmatine chloride 10 mM
-0.2
N.D.
+0.2
-0.8
N.D.
in planta
apoplastic; Green bean; 6 days
+0.1
N.D.
-1.0
+0.2
N.D.
stress
KB with Harmine 10 mM
-0.1
N.D.
+1.2
-1.7
N.D.
kb
KB
-0.1
N.D.
+0.6
-0.5
N.D.
stress
KB with Diallyl sulfide 10 mM
-0.1
N.D.
+0.7
-0.5
N.D.
stress
KB with Paclitaxel 10 mM
-0.2
N.D.
+0.7
-0.3
N.D.
stress
KB with 4-hydroxychalcone 10 mM
-0.1
N.D.
+0.8
-0.2
N.D.
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