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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1082 and Psyr_1083 are separated by 5 nucleotides
Psyr_1083 and Psyr_1084 are separated by 393 nucleotides
Psyr_1084 and Psyr_1085 are separated by 583 nucleotides
Psyr_1085 and Psyr_1086 are separated by 156 nucleotides
Psyr_1082: Psyr_1082 - Glutaredoxin, at 1,223,955 to 1,224,305
_1082
Psyr_1083: Psyr_1083 - 37kDa nucleoid-associated bacterial protein, at 1,224,311 to 1,225,312
_1083
Psyr_1084: Psyr_1084 - Histone-like bacterial DNA-binding protein, at 1,225,706 to 1,225,987
_1084
Psyr_1085: Psyr_1085 - 23S rRNA m(6)A-1618 methyltransferase, at 1,226,571 to 1,227,557
_1085
Psyr_1086: Psyr_1086 - valyl-tRNA synthetase, at 1,227,714 to 1,230,560
_1086
Group
Condition
Psyr
_1082
Psyr
_1083
Psyr
_1084
Psyr
_1085
Psyr
_1086
stress
KB with Rifampicin 0.1 mg/ml
-0.1
+0.0
-0.9
-0.4
N.D.
stress
KB with Totarol 10 mM
-0.5
-0.1
-0.7
-0.1
N.D.
in planta
apoplastic, chopping recovery; Green bean
-0.2
+0.2
-1.1
-0.1
N.D.
stress
KB with Nitrofurantoin 0.0625 mg/ml
+0.1
-0.2
-1.1
-0.0
N.D.
kb
KB
-0.1
+0.0
-0.7
-0.5
N.D.
stress
KB with Rotenone 0.125 mg/ml
-0.0
+0.3
-1.0
-0.2
N.D.
stress
KB with Harmol 10 mM
-0.6
+0.2
-0.1
-0.4
N.D.
in planta
epiphytic; Lima bean
+0.5
+0.0
-1.5
+0.2
N.D.
stress
KB with Levodopa 10 mM
-0.4
-0.3
+0.8
-0.6
N.D.
stress
KB with Harmol Hydrochloride 10 mM
+0.4
-0.1
-0.6
+0.2
N.D.
stress
KB with Gossypetin 10 mM
-0.0
-0.1
+0.5
-0.5
N.D.
in planta
apoplastic; Green bean; 6 days
+0.6
+0.1
-0.3
-0.2
N.D.
stress
KB with d-limonene 10 mM
+0.0
+0.1
+0.5
-0.5
N.D.
stress
KB with L-alliin 10 mM
-0.1
-0.0
+0.9
-0.3
N.D.
stress
KB with Solanesol 10 mM
-0.1
-0.2
+1.0
-0.0
N.D.
stress
KB with 4-hydroxychalcone 10 mM
-0.3
+0.1
+1.0
-0.2
N.D.
stress
KB with Piperic 10 mM
-0.1
+0.2
+0.8
-0.2
N.D.
stress
KB with Curcumin 10 mM
-0.0
-0.0
+0.9
-0.2
N.D.
stress
KB with 4-acetoxyphenol 10 mM
+0.4
+0.1
+1.0
-0.6
N.D.
stress
KB with Palmatine chloride 10 mM
-0.3
+0.1
+1.2
-0.1
N.D.
stress
KB with Prenyletin 10 mM
+0.1
+0.0
+0.9
-0.1
N.D.
stress
KB with Sinomenine 10 mM
+0.1
-0.2
+0.8
+0.6
N.D.
stress
KB with Chloramphenicol 1.55 ug/ml
+0.3
+0.4
+0.5
+0.0
N.D.
in planta
epiphytic; Lima bean
-0.1
+0.2
+1.8
-0.6
N.D.
stress
KB with Helenine 10 mM
-0.1
-0.1
+1.6
+0.0
N.D.
stress
KB with Palmatine 10 mM
+0.1
+0.3
+1.1
-0.1
N.D.
stress
KB with Benzalkonium chloride 1.55 ug/ml
+0.1
+0.4
+0.9
+0.4
N.D.
stress
KB with Acriflavine 1.25 ug/ml
+0.1
+0.3
+1.2
+0.4
N.D.
stress
KB with Mitomycin C 0.05 ug/ml
+0.0
-0.4
+2.4
+0.2
N.D.
stress
KB with Acridine orange 3.125 ug/ml
+0.4
+0.0
+2.4
+0.2
N.D.
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