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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_1061 and Psyr_1062 are separated by 40 nucleotides
Psyr_1062 and Psyr_1063 are separated by 100 nucleotides
Psyr_1063 and Psyr_1064 are separated by 815 nucleotides
Psyr_1064 and Psyr_1065 are separated by 202 nucleotides
Psyr_1061: Psyr_1061 - alginate biosynthesis protein Alg44, at 1,201,929 to 1,203,101
_1061
Psyr_1062: Psyr_1062 - alginate biosynthesis protein Alg8, at 1,203,142 to 1,204,623
_1062
Psyr_1063: Psyr_1063 - GDP-mannose 6-dehydrogenase, at 1,204,724 to 1,206,040
_1063
Psyr_1064: Psyr_1064 - Protein of unknown function DUF328, at 1,206,856 to 1,207,635
_1064
Psyr_1065: Psyr_1065 - Polysaccharide deacetylase, at 1,207,838 to 1,209,016
_1065
Group
Condition
Psyr
_1061
Psyr
_1062
Psyr
_1063
Psyr
_1064
Psyr
_1065
in planta
apoplastic, chopping recovery; Green bean
-0.5
-0.9
-0.6
-0.4
-0.4
in planta
apoplastic, chopping recovery; Green bean
-0.7
-0.7
-0.6
-0.6
-0.1
in planta
apoplastic, chopping recovery; Green bean
-0.4
-0.6
-0.7
-0.6
-0.1
in planta
apoplastic, chopping recovery; Green bean
-0.1
-0.6
-0.4
-0.1
-0.3
stress
KB with Benzalkonium chloride 1.55 ug/ml
-0.5
-0.2
-0.1
-0.2
-0.4
in planta
apoplastic; Green bean; 6 days
-0.4
-0.4
-0.6
-0.3
+0.3
in planta
apoplastic; Green bean; 6 days
-0.1
-0.5
-0.4
-0.3
+0.1
stress
KB with Levodopa 10 mM
+0.3
-0.3
+0.0
-0.3
-0.6
stress
KB with Novobiocin 7.75 ug/ml
-0.2
-0.4
-0.0
+0.2
-0.3
stress
KB with Harmine 10 mM
-0.5
-0.2
+0.2
+0.2
-0.1
stress
KB with Emodin 10 mM
+0.4
-0.0
-0.2
-0.1
-0.3
stress
KB with capsaicin 0.25 mg/ml
+0.4
-0.1
+0.0
-0.2
-0.3
stress
KB with Avocadyne 10 mM
+0.4
+0.0
-0.2
-0.2
-0.2
stress
KB with Sclareolide 10 mM
+0.5
-0.2
+0.0
-0.1
-0.1
stress
KB with Terpene 10 mM
+0.4
-0.2
+0.1
-0.2
-0.1
stress
KB with Piperacillin 0.775 ug/ml
-0.1
-0.0
+0.4
-0.3
+0.1
stress
KB with Sinomenine 10 mM
-0.4
-0.0
+0.3
+0.0
+0.2
stress
KB with 4-acetoxyphenol 10 mM
+0.4
+0.1
-0.1
-0.2
-0.0
stress
KB with Nonanoic 10 mM
+0.8
-0.0
+0.1
-0.2
-0.5
stress
KB with Chaulmoogric 10 mM
+0.5
+0.0
+0.1
-0.3
-0.1
stress
KB with Veratrine 10 mM
+0.7
-0.1
-0.0
-0.1
-0.2
stress
KB with Diallyl sulfide 10 mM
+0.5
-0.3
+0.1
+0.1
-0.0
stress
KB with Nalidixic 0.775 ug/ml
+0.4
-0.2
+0.3
-0.2
+0.1
stress
KB with Mitomycin C 0.05 ug/ml
+0.4
-0.1
-0.1
+0.2
+0.2
stress
KB with Palmatine chloride 10 mM
+0.5
-0.1
+0.2
+0.0
-0.0
stress
KB with Helenine 10 mM
+0.4
-0.1
+0.1
+0.2
+0.2
stress
KB with Dimethyl Sulfoxide 0.42 vol%
+0.5
-0.1
+0.3
-0.1
+0.1
stress
KB with Trimethoprim 15.6 ug/ml
+0.4
+0.2
+0.3
-0.2
+0.2
stress
KB with Acridine orange 3.125 ug/ml
+0.2
-0.0
-0.1
+0.3
+0.6
stress
KB with Berberine 15.6 ug/ml
+0.4
-0.0
+0.5
-0.1
+0.4
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