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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Number of genes on each side:
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_0993 and Psyr_0994 are separated by 24 nucleotides
Psyr_0994 and Psyr_0995 are separated by 256 nucleotides
Psyr_0995 and Psyr_0996 are separated by 26 nucleotides
Psyr_0996 and Psyr_0997 are separated by 41 nucleotides
Psyr_0993: Psyr_0993 - transcriptional regulator, LuxR family, at 1,125,648 to 1,128,410
_0993
Psyr_0994: Psyr_0994 - Metal-dependent phosphohydrolase, HD subdomain protein, at 1,128,435 to 1,129,616
_0994
Psyr_0995: Psyr_0995 - Flavin reductase-like protein, at 1,129,873 to 1,130,409
_0995
Psyr_0996: Psyr_0996 - Alpha/beta hydrolase fold protein, at 1,130,436 to 1,131,215
_0996
Psyr_0997: Psyr_0997 - Endoribonuclease L-PSP, at 1,131,257 to 1,131,640
_0997
Group
Condition
Psyr
_0993
Psyr
_0994
Psyr
_0995
Psyr
_0996
Psyr
_0997
stress
KB with Tetracycline 0.0015 ug/ml
+0.2
+0.0
-0.4
-1.3
-0.2
stress
KB with Oxonitine 10 mM
-0.1
-0.2
-0.5
-0.2
-0.3
stress
KB with Carbenicillin 3.1 ug/ml
-0.1
-0.2
+0.8
-1.7
-0.2
stress
KB with Avocadyne 10 mM
-0.0
+0.1
-0.9
-0.3
-0.1
stress
KB with Emodin 10 mM
-0.0
-0.2
-0.4
-0.6
-0.1
in planta
epiphytic; Lima bean
+0.1
-0.2
+0.3
-0.7
-0.7
stress
KB with Levodopa 10 mM
-0.1
-0.0
-0.4
-0.5
-0.1
stress
KB with Strychnine Sulfate 10 mM
-0.0
-0.0
-0.6
-0.2
-0.3
stress
KB with Nalidixic 0.775 ug/ml
-0.1
-0.1
-0.3
-0.3
-0.2
stress
KB with Veratrine 10 mM
-0.0
+0.0
-0.8
-0.2
-0.1
in planta
apoplastic; Green bean; 6 days
-0.1
+0.1
-0.1
-0.9
-0.1
stress
KB with Acridine orange 3.125 ug/ml
+0.1
-0.2
-0.3
-0.6
-0.0
stress
KB with Phloretin 125 ug/ml
-0.3
-0.1
+0.3
-0.8
+0.0
stress
KB with Sclareolide 10 mM
+0.0
+0.1
-0.3
-0.5
-0.2
in planta
epiphytic; Lima bean
+0.1
+0.2
-0.6
-0.2
-0.4
stress
KB with Methyl-2-Hydroxy-Phenylproprionate 10 mM
-0.0
-0.2
+0.1
-0.6
-0.1
stress
KB with Dimethyl Sulfoxide 0.42 vol%
+0.0
-0.2
+0.1
-0.4
-0.3
kb
KB
-0.1
+0.1
-0.9
+0.2
-0.1
stress
KB with Terpene 10 mM
+0.1
+0.1
-0.4
-0.4
-0.1
stress
KB with Auraptene 10 mM
-0.1
+0.2
-0.2
-0.4
-0.1
stress
KB with Piperine 10 mM
+0.0
+0.1
-0.7
-0.1
+0.1
stress
KB with Mitomycin C 0.05 ug/ml
+0.1
-0.1
+0.1
-0.9
+0.3
in planta
apoplastic, chopping recovery; Green bean
+0.2
-0.2
-0.4
+0.2
-0.1
in planta
apoplastic; Green bean; 6 days
+0.0
+0.1
+0.3
-0.6
-0.0
stress
KB with Acriflavine 1.25 ug/ml
-0.1
+0.1
+0.3
-0.5
+0.1
in planta
Green bean; epiphytic
-0.3
+0.2
+0.2
-0.2
+0.1
stress
KB with Benzalkonium chloride 1.55 ug/ml
-0.1
+0.2
-0.3
-0.3
+0.5
stress
KB with Nitrofurantoin 31.25 ug/ml
+0.0
-0.2
+0.6
-0.3
+0.2
in planta
apoplastic, chopping recovery; Green bean
+0.4
+0.0
-0.4
+0.3
+0.1
in planta
Green bean; epiphytic
-0.2
+0.2
+0.6
-0.1
+0.1
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