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Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_0839 and Psyr_0840 are separated by 366 nucleotides
Psyr_0840 and Psyr_0841 are separated by 100 nucleotides
Psyr_0841 and Psyr_0842 overlap by 2 nucleotides
Psyr_0842 and Psyr_0843 are separated by 17 nucleotides
Psyr_0839: Psyr_0839 - Deoxyribose-phosphate aldolase, at 950,669 to 951,454
_0839
Psyr_0840: Psyr_0840 - Pentapeptide repeat protein, at 951,821 to 952,165
_0840
Psyr_0841: Psyr_0841 - conserved hypothetical protein, at 952,266 to 953,936
_0841
Psyr_0842: Psyr_0842 - Peptidoglycan glycosyltransferase, at 953,935 to 956,256
_0842
Psyr_0843: Psyr_0843 - TPR repeat protein, at 956,274 to 957,017
_0843
Group
Condition
Psyr
_0839
Psyr
_0840
Psyr
_0841
Psyr
_0842
Psyr
_0843
stress
KB with Carbenicillin 3.1 ug/ml
+0.1
-0.1
+0.7
-2.1
-2.2
stress
KB with Acriflavine 1.25 ug/ml
+0.1
-0.2
-0.2
+0.1
-0.5
stress
KB with Palmatine 10 mM
-0.3
-0.0
+0.0
-0.6
+0.4
stress
KB with Conessine 10 mM
+0.1
-0.2
-0.3
-0.2
+0.2
stress
KB with Acridine orange 3.125 ug/ml
-0.1
+0.4
-0.5
-0.2
-0.0
in planta
apoplastic; Green bean; 6 days
+0.1
+0.2
-0.3
-0.3
-0.1
stress
KB with Lupeol 10 mM
+0.1
-0.3
-0.3
-0.1
+0.4
in planta
apoplastic, chopping recovery; Green bean
+0.5
-0.1
-0.5
-0.1
+0.2
stress
KB with d-limonene 10 mM
-0.2
+0.3
-0.4
-0.1
+0.3
stress
KB with Methyl-2-Hydroxy-Phenylproprionate 10 mM
-0.3
+0.2
-0.2
+0.1
+0.2
in planta
apoplastic, chopping recovery; Green bean
+0.5
-0.0
-0.3
-0.1
+0.1
stress
KB with Harmine 10 mM
+0.3
+0.2
-0.2
-0.4
+0.2
stress
KB with Hydrastine (1R, 9S) 10 mM
+0.1
+0.2
-0.4
-0.2
+0.4
stress
KB with Curcumin 10 mM
+0.1
+0.4
-0.3
-0.1
+0.2
stress
KB with Avocadyne 10 mM
+0.0
+0.4
-0.4
-0.1
+0.3
stress
KB with Harmol 10 mM
-0.0
+0.4
-0.0
-0.2
+0.4
stress
KB with Levodopa 10 mM
+0.2
+0.3
-0.0
-0.2
+0.2
in planta
apoplastic, chopping recovery; Green bean
+0.5
+0.1
-0.2
-0.1
+0.2
in planta
apoplastic, chopping recovery; Green bean
+0.5
+0.2
-0.2
-0.2
+0.3
in planta
epiphytic; Lima bean
-0.3
+0.4
+0.2
+0.0
+0.2
stress
KB with Trimethoprim 15.6 ug/ml
+0.2
+0.3
-0.2
+0.1
+0.3
stress
KB with Piperine 10 mM
+0.4
+0.2
-0.2
-0.0
+0.4
stress
KB with Rotenone 0.125 mg/ml
+0.2
+0.1
-0.1
+0.1
+0.4
stress
KB with Piperacillin 0.775 ug/ml
+0.3
-0.1
-0.1
+0.1
+0.5
stress
KB with Phloretin 125 ug/ml
+0.3
+0.2
-0.2
+0.2
+0.3
stress
KB with Tetracycline 0.0015 ug/ml
+0.3
+0.1
-0.0
+0.1
+0.5
stress
KB with Dimethyl Sulfoxide 1.25 vol%
+0.3
+0.1
+0.1
+0.2
+0.3
stress
KB with Flavone 0.125 mg/ml
+0.1
+0.1
+0.2
+0.1
+0.5
stress
KB with Mitomycin C 0.05 ug/ml
+0.1
+0.2
-0.0
-0.1
+1.0
stress
KB with Novobiocin 7.75 ug/ml
+0.3
+0.0
+1.1
+0.0
+0.6
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