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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_0825 and Psyr_0826 are separated by 383 nucleotides
Psyr_0826 and Psyr_0827 are separated by 253 nucleotides
Psyr_0827 and Psyr_0828 overlap by 4 nucleotides
Psyr_0828 and Psyr_0829 are separated by 228 nucleotides
Psyr_0825: Psyr_0825 - conserved hypothetical protein, at 933,674 to 934,540
_0825
Psyr_0826: Psyr_0826 - glucose-6-phosphate isomerase, at 934,924 to 936,588
_0826
Psyr_0827: Psyr_0827 - pantothenate synthetase, at 936,842 to 937,693
_0827
Psyr_0828: Psyr_0828 - ketopantoate hydroxymethyltransferase, at 937,690 to 938,490
_0828
Psyr_0829: Psyr_0829 - 7, 8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK, at 938,719 to 939,225
_0829
Group
Condition
Psyr
_0825
Psyr
_0826
Psyr
_0827
Psyr
_0828
Psyr
_0829
in planta
apoplastic, chopping recovery; Green bean
-0.2
-3.1
-3.2
-1.5
N.D.
in planta
Green bean; epiphytic
+0.2
-2.4
-4.3
-1.4
N.D.
in planta
apoplastic, chopping recovery; Green bean
-0.2
-3.6
-2.9
-0.5
N.D.
in planta
apoplastic, chopping recovery; Green bean
-0.3
-3.2
-3.3
-0.4
N.D.
in planta
apoplastic, chopping recovery; Green bean
-0.1
-3.2
-2.4
-1.2
N.D.
in planta
Green bean; epiphytic
+0.3
-2.5
-2.5
-1.5
N.D.
in planta
epiphytic; Lima bean
-0.5
-2.4
-3.4
+0.2
N.D.
in planta
apoplastic; Green bean; 6 days
+0.2
-3.5
-0.6
-1.8
N.D.
in planta
apoplastic; Green bean; 6 days
+0.2
-3.2
-0.9
-1.7
N.D.
in planta
epiphytic; Lima bean
-0.1
-3.0
-3.4
+1.3
N.D.
stress
KB with capsaicin 0.125 mg/ml
-0.0
-3.1
-1.0
-0.1
N.D.
stress
KB with Flavone 0.125 mg/ml
-0.2
-3.5
-0.6
-0.1
N.D.
stress
KB with Nitrofurantoin 0.0625 mg/ml
+0.2
-3.5
-0.4
-0.3
N.D.
stress
KB with Rotenone 0.25 mg/ml
-0.0
-2.2
-0.8
-0.7
N.D.
kb
KB
+0.0
-2.4
-0.4
-0.9
N.D.
stress
KB with Acriflavine 1.25 ug/ml
-0.1
-3.5
+0.6
-0.5
N.D.
stress
KB with capsaicin 0.25 mg/ml
+0.1
-3.2
-0.3
+0.1
N.D.
stress
KB with Piperacillin 0.775 ug/ml
+0.2
-2.2
-0.9
-0.3
N.D.
stress
KB with Phloretin 125 ug/ml
+0.1
-3.2
-0.4
+0.4
N.D.
stress
KB with Chaulmoogric 10 mM
-0.2
-1.2
-1.9
+0.5
N.D.
stress
KB with Avocatin A 10 mM
-0.1
-1.8
-1.1
+0.5
N.D.
stress
KB with Nonanoic 10 mM
+0.2
-1.0
-1.9
+0.6
N.D.
stress
KB with Acridine orange 3.125 ug/ml
-0.0
-2.2
-0.3
+1.2
N.D.
stress
KB with Piperic 10 mM
-0.1
-0.8
-1.5
+1.1
N.D.
stress
KB with Harmine 10 mM
+0.3
-2.4
+1.1
+0.1
N.D.
stress
KB with Palmatine chloride 10 mM
+0.2
-2.1
+0.3
+0.9
N.D.
stress
KB with Harmol 10 mM
+0.2
-0.9
+1.1
+1.7
N.D.
stress
KB with Novobiocin 7.75 ug/ml
+0.3
+2.9
+0.2
+0.7
N.D.
stress
KB with Mitomycin C 0.05 ug/ml
+0.3
+4.2
-0.6
+0.6
N.D.
stress
KB with Carbenicillin 3.1 ug/ml
+0.3
+4.2
+4.1
+1.9
N.D.
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