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Protein
Homologs
Fitness for 5 genes in
Pseudomonas syringae pv. syringae B728a ΔmexB
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psyr_0782 and Psyr_0783 overlap by 4 nucleotides
Psyr_0783 and Psyr_0784 are separated by 9 nucleotides
Psyr_0784 and Psyr_0785 are separated by 36 nucleotides
Psyr_0785 and Psyr_0786 are separated by 30 nucleotides
Psyr_0782: Psyr_0782 - CheD, at 888,963 to 889,496
_0782
Psyr_0783: Psyr_0783 - MCP methyltransferase, CheR-type, at 889,493 to 890,302
_0783
Psyr_0784: Psyr_0784 - CheW-like protein, at 890,312 to 890,851
_0784
Psyr_0785: Psyr_0785 - Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer, at 890,888 to 892,543
_0785
Psyr_0786: Psyr_0786 - CheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt, at 892,574 to 894,691
_0786
Group
Condition
Psyr
_0782
Psyr
_0783
Psyr
_0784
Psyr
_0785
Psyr
_0786
kb
KB
-0.5
-0.1
N.D.
-0.1
-0.2
stress
KB with Veratrine 10 mM
-0.3
-0.2
N.D.
-0.2
-0.1
in planta
epiphytic; Lima bean
-0.2
-0.2
N.D.
-0.3
+0.1
stress
KB with Carbenicillin 3.1 ug/ml
-0.6
-0.1
N.D.
-0.0
+0.3
stress
KB with D-Salicin 240 ug/ml
+0.2
-0.1
N.D.
-0.1
-0.4
stress
KB with Benzalkonium chloride 1.55 ug/ml
+0.0
-0.3
N.D.
-0.3
+0.2
stress
KB with Chaulmoogric 10 mM
-0.4
-0.2
N.D.
+0.1
+0.3
stress
KB with Solanesol 10 mM
-0.3
+0.3
N.D.
-0.2
-0.0
stress
KB with Terpene 10 mM
+0.3
+0.1
N.D.
-0.1
-0.6
in planta
apoplastic; Green bean; 6 days
+0.3
-0.1
N.D.
-0.2
-0.2
in planta
apoplastic, chopping recovery; Green bean
+0.4
-0.6
N.D.
+0.3
-0.2
stress
KB with Berberine 15.6 ug/ml
-0.4
-0.1
N.D.
+0.2
+0.2
in planta
apoplastic; Green bean; 6 days
+0.3
-0.4
N.D.
+0.1
+0.0
stress
KB with Dimethyl Sulfoxide 0.42 vol%
-0.4
+0.0
N.D.
+0.3
+0.1
stress
KB with Lupeol 10 mM
-0.1
+0.2
N.D.
+0.2
-0.2
in planta
apoplastic, chopping recovery; Green bean
+0.7
-0.6
N.D.
+0.3
-0.1
stress
KB with Hydrastine (1R, 9S) 10 mM
+0.2
+0.1
N.D.
+0.2
-0.3
in planta
apoplastic, chopping recovery; Green bean
+0.6
-0.5
N.D.
+0.3
-0.1
stress
KB with Acridine orange 3.125 ug/ml
-0.4
+0.1
N.D.
+0.7
-0.1
in planta
apoplastic, chopping recovery; Green bean
+0.6
-0.3
N.D.
+0.1
+0.0
stress
KB with Chloramphenicol 1.55 ug/ml
+0.4
-0.2
N.D.
+0.0
+0.2
stress
KB with Nitrofurantoin 0.0625 mg/ml
+0.3
-0.1
N.D.
+0.3
+0.0
stress
KB with Acriflavine 1.25 ug/ml
+0.1
-0.1
N.D.
+0.1
+0.4
in planta
Green bean; epiphytic
-0.5
+0.1
N.D.
+0.4
+0.4
stress
KB with Ampicillin 0.775 ug/ml
-0.2
+0.1
N.D.
+0.1
+0.4
stress
KB with Trimethoprim 15.6 ug/ml
+0.3
-0.1
N.D.
+0.2
+0.2
stress
KB with Piperacillin 0.775 ug/ml
-0.0
-0.1
N.D.
+0.2
+0.6
stress
KB with Escin 10 mM
-0.0
-0.0
N.D.
+0.3
+0.5
stress
KB with Harmine 10 mM
+0.4
+0.3
N.D.
+0.0
-0.0
in planta
Green bean; epiphytic
+0.2
-0.1
N.D.
+0.4
+0.2
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